5T32GM08276/GM/NIGMS NIH HHS/United States[Grant Number] - Search Results

Year	Number of Results
2003	2
2004	2
2005	4
2006	3
2008	1
2022	0

1

On the evolution of structure in aminoacyl-tRNA synthetases.

O'Donoghue P, Luthey-Schulten Z. O'Donoghue P, et al. Microbiol Mol Biol Rev. 2003 Dec;67(4):550-73. doi: 10.1128/MMBR.67.4.550-573.2003. Microbiol Mol Biol Rev. 2003. PMID: 14665676 Free PMC article. Review.

2

Multiple Alignment of protein structures and sequences for VMD.

Eargle J, Wright D, Luthey-Schulten Z. Eargle J, et al. Bioinformatics. 2006 Feb 15;22(4):504-6. doi: 10.1093/bioinformatics/bti825. Epub 2005 Dec 8. Bioinformatics. 2006. PMID: 16339280

3

Probing single-stranded DNA conformational flexibility using fluorescence spectroscopy.

Murphy MC, Rasnik I, Cheng W, Lohman TM, Ha T. Murphy MC, et al. Biophys J. 2004 Apr;86(4):2530-7. doi: 10.1016/S0006-3495(04)74308-8. Biophys J. 2004. PMID: 15041689 Free PMC article.

4

Evolutionary profiles from the QR factorization of multiple sequence alignments.

Sethi A, O'Donoghue P, Luthey-Schulten Z. Sethi A, et al. Proc Natl Acad Sci U S A. 2005 Mar 15;102(11):4045-50. doi: 10.1073/pnas.0409715102. Epub 2005 Mar 1. Proc Natl Acad Sci U S A. 2005. PMID: 15741270 Free PMC article.

5

The euryarchaeota, nature's medium for engineering of single-stranded DNA-binding proteins.

Robbins JB, McKinney MC, Guzman CE, Sriratana B, Fitz-Gibbon S, Ha T, Cann IK. Robbins JB, et al. J Biol Chem. 2005 Apr 15;280(15):15325-39. doi: 10.1074/jbc.M412870200. Epub 2005 Jan 24. J Biol Chem. 2005. PMID: 15671019 Free article.

6

Methanosarcina acetivorans flap endonuclease 1 activity is inhibited by a cognate single-stranded-DNA-binding protein.

Lin Y, Guzman CE, McKinney MC, Nair SK, Ha T, Cann IK. Lin Y, et al. J Bacteriol. 2006 Sep;188(17):6153-67. doi: 10.1128/JB.00045-06. J Bacteriol. 2006. PMID: 16923882 Free PMC article.

7

Functional analysis of multiple single-stranded DNA-binding proteins from Methanosarcina acetivorans and their effects on DNA synthesis by DNA polymerase BI.

Robbins JB, Murphy MC, White BA, Mackie RI, Ha T, Cann IK. Robbins JB, et al. J Biol Chem. 2004 Feb 20;279(8):6315-26. doi: 10.1074/jbc.M304491200. Epub 2003 Dec 4. J Biol Chem. 2004. PMID: 14676214 Free article.

8

Dynamics of Recognition between tRNA and elongation factor Tu.

Eargle J, Black AA, Sethi A, Trabuco LG, Luthey-Schulten Z. Eargle J, et al. J Mol Biol. 2008 Apr 11;377(5):1382-405. doi: 10.1016/j.jmb.2008.01.073. Epub 2008 Feb 4. J Mol Biol. 2008. PMID: 18336835 Free PMC article.

9

Evolutionary profiles derived from the QR factorization of multiple structural alignments gives an economy of information.

O'Donoghue P, Luthey-Schulten Z. O'Donoghue P, et al. J Mol Biol. 2005 Feb 25;346(3):875-94. doi: 10.1016/j.jmb.2004.11.053. Epub 2005 Jan 22. J Mol Biol. 2005. PMID: 15713469

10

Visualizing the dual space of biological molecules.

Eargle J, Luthey-Schulten Z. Eargle J, et al. Comput Biol Chem. 2006 Jun;30(3):219-26. doi: 10.1016/j.compbiolchem.2006.01.004. Epub 2006 May 3. Comput Biol Chem. 2006. PMID: 16675303

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