A phylogenetic analysis of woodpeckers and their allies using 12S, Cyt b, and COI nucleotide sequences (class Aves; order Piciformes)

Mol Phylogenet Evol. 2005 Aug;36(2):233-48. doi: 10.1016/j.ympev.2005.03.015.

Abstract

Although the woodpeckers have long been recognized as a natural, monophyletic taxon, morphological analyses of their intra- and intergeneric relationships have produced conflicting results. To clarify this issue, and as part of a larger study of piciform relationships, nucleotide sequences for the 12S ribosomal RNA (12S; 1123 bp), cytochrome b (Cyt b; 1022 bp), and cytochrome oxidase c subunit 1 (COI; 1512 bp) mitochondrial genes were obtained from 34 piciform species that included 16 of the 23 currently recognized woodpecker genera (subfamily Picinae), three piculets (subfamily Picumninae), a wryneck (subfamily Jynginae), a honeyguide (family Indicatoridae), and three barbets (infraorder Ramphastides). Analyses were conducted on the individual and combined 12S, Cyt b, and COI sequences with maximum parsimony, neighbor-joining, maximum likelihood, and Bayesian algorithms. Based on the strong, congruent support among the different data partitions and models of sequence evolution, a highly resolved consensus of the relationships among woodpeckers and their allies could be formed. The monophyly of Indicatoridae + Picidae (infraorder Picides), Picidae, Picinae + Picumninae, and Picinae was strongly supported in all analyses. However, the tribes Colaptini, Picini, Campephilini, and Campetherini were shown to be paraphyletic as were the genera of Colaptes and Piculus. A revision of the tribal-level classification of woodpeckers is proposed and the importance of plumage convergence among woodpeckers is discussed.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Birds / classification
  • Birds / genetics*
  • Codon / genetics
  • Cytochromes b / genetics
  • DNA, Mitochondrial / chemistry
  • DNA, Mitochondrial / genetics*
  • Electron Transport Complex IV / genetics
  • Genetic Variation
  • Models, Genetic
  • Molecular Sequence Data
  • Phylogeny*
  • Point Mutation
  • Polymorphism, Single Nucleotide
  • RNA, Ribosomal / genetics
  • Sequence Analysis, DNA
  • Species Specificity

Substances

  • Codon
  • DNA, Mitochondrial
  • RNA, Ribosomal
  • RNA, ribosomal, 12S
  • Cytochromes b
  • Electron Transport Complex IV

Associated data

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