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Multisite Evaluation of Next-Generation Methods for Small RNA Quantification.
Herbert ZT, Thimmapuram J, Xie S, Kershner JP, Kolling FW, Ringelberg CS, LeClerc A, Alekseyev YO, Fan J, Podnar JW, Stevenson HS, Sommerville G, Gupta S, Berkeley M, Koeman J, Perera A, Scott AR, Grenier JK, Malik J, Ashton JM, Pivarski KL, Wang X, Kuffel G, Mesa TE, Smith AT, Shen J, Takata Y, Volkert TL, Love JA, Zhang Y, Wang J, Xuei X, Adams M, Levine SS. Herbert ZT, et al. Among authors: adams m. J Biomol Tech. 2020 Jul;31(2):47-56. doi: 10.7171/jbt.20-3102-001. J Biomol Tech. 2020. PMID: 31966025 Free PMC article.
Cross-site comparison of ribosomal depletion kits for Illumina RNAseq library construction.
Herbert ZT, Kershner JP, Butty VL, Thimmapuram J, Choudhari S, Alekseyev YO, Fan J, Podnar JW, Wilcox E, Gipson J, Gillaspy A, Jepsen K, BonDurant SS, Morris K, Berkeley M, LeClerc A, Simpson SD, Sommerville G, Grimmett L, Adams M, Levine SS. Herbert ZT, et al. Among authors: adams m. BMC Genomics. 2018 Mar 15;19(1):199. doi: 10.1186/s12864-018-4585-1. BMC Genomics. 2018. PMID: 29703133 Free PMC article.
A Review of the Scientific Rigor, Reproducibility, and Transparency Studies Conducted by the ABRF Research Groups.
Mische SM, Fisher NC, Meyn SM, Sol-Church K, Hegstad-Davies RL, Weis-Garcia F, Adams M, Ashton JM, Delventhal KM, Dragon JA, Holmes L, Jagtap P, Kubow KE, Mason CE, Palmblad M, Searle BC, Turck CW, Knudtson KL. Mische SM, et al. Among authors: adams m. J Biomol Tech. 2020 Apr;31(1):11-26. doi: 10.7171/jbt.20-3101-003. J Biomol Tech. 2020. PMID: 31969795 Free PMC article. Review.
Cross-Site Evaluation of Commercial Sanger Sequencing Chemistries.
Podnar JW, Pantano L, Zeller MJ, Kolling FW, Zhang Y, Alekseyev YO, Niece J, Deiderick H, Fan J, Xuei X, Kieleczawa J, Levine SS, Herbert ZT, Adams M. Podnar JW, et al. Among authors: adams m. J Biomol Tech. 2020 Sep;31(3):88-93. doi: 10.7171/jbt.20-3103-002. J Biomol Tech. 2020. PMID: 32831655 Free PMC article.
Integrated Epigenome, Exome, and Transcriptome Analyses Reveal Molecular Subtypes and Homeotic Transformation in Uterine Fibroids.
George JW, Fan H, Johnson B, Carpenter TJ, Foy KK, Chatterjee A, Patterson AL, Koeman J, Adams M, Madaj ZB, Chesla D, Marsh EE, Triche TJ, Shen H, Teixeira JM. George JW, et al. Among authors: adams m. Cell Rep. 2019 Dec 17;29(12):4069-4085.e6. doi: 10.1016/j.celrep.2019.11.077. Cell Rep. 2019. PMID: 31851934 Free PMC article.
DNA methylation dynamics and dysregulation delineated by high-throughput profiling in the mouse.
Zhou W, Hinoue T, Barnes B, Mitchell O, Iqbal W, Lee SM, Foy KK, Lee KH, Moyer EJ, VanderArk A, Koeman JM, Ding W, Kalkat M, Spix NJ, Eagleson B, Pospisilik JA, Szabó PE, Bartolomei MS, Vander Schaaf NA, Kang L, Wiseman AK, Jones PA, Krawczyk CM, Adams M, Porecha R, Chen BH, Shen H, Laird PW. Zhou W, et al. Among authors: adams m. Cell Genom. 2022 Jul 13;2(7):100144. doi: 10.1016/j.xgen.2022.100144. Cell Genom. 2022. PMID: 35873672 Free PMC article.
Prior metabolite extraction fully preserves RNAseq quality and enables integrative multi-'omics analysis of the liver metabolic response to viral infection.
Madaj ZB, Dahabieh MS, Kamalumpundi V, Muhire B, Pettinga J, Siwicki RA, Ellis AE, Isaguirre C, Escobar Galvis ML, DeCamp L, Jones RG, Givan SA, Adams M, Sheldon RD. Madaj ZB, et al. Among authors: adams m. RNA Biol. 2023 Jan;20(1):186-197. doi: 10.1080/15476286.2023.2204586. RNA Biol. 2023. PMID: 37095747 Free PMC article.
5,777 results