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The genome of the stress-tolerant wild tomato species Solanum pennellii.
Nat Genet. 2014 Sep;46(9):1034-8. doi: 10.1038/ng.3046. Epub 2014 Jul 27.
Nat Genet. 2014.
PMID: 25064008
Free PMC article.
Exploring genetic variation in the tomato (Solanum section Lycopersicon) clade by whole-genome sequencing.
100 Tomato Genome Sequencing Consortium; Aflitos S, Schijlen E, de Jong H, de Ridder D, Smit S, Finkers R, Wang J, Zhang G, Li N, Mao L, Bakker F, Dirks R, Breit T, Gravendeel B, Huits H, Struss D, Swanson-Wagner R, van Leeuwen H, van Ham RC, Fito L, Guignier L, Sevilla M, Ellul P, Ganko E, Kapur A, Reclus E, de Geus B, van de Geest H, Te Lintel Hekkert B, van Haarst J, Smits L, Koops A, Sanchez-Perez G, van Heusden AW, Visser R, Quan Z, Min J, Liao L, Wang X, Wang G, Yue Z, Yang X, Xu N, Schranz E, Smets E, Vos R, Rauwerda J, Ursem R, Schuit C, Kerns M, van den Berg J, Vriezen W, Janssen A, Datema E, Jahrman T, Moquet F, Bonnet J, Peters S.
100 Tomato Genome Sequencing Consortium, et al.
Plant J. 2014 Oct;80(1):136-48. doi: 10.1111/tpj.12616. Epub 2014 Sep 3.
Plant J. 2014.
PMID: 25039268
Free article.
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Chasing breeding footprints through structural variations in Cucumis melo and wild relatives.
Demirci S, Fuentes RR, van Dooijeweert W, Aflitos S, Schijlen E, Hesselink T, de Ridder D, van Dijk ADJ, Peters S.
Demirci S, et al.
G3 (Bethesda). 2021 Jan 18;11(1):jkaa038. doi: 10.1093/g3journal/jkaa038.
G3 (Bethesda). 2021.
PMID: 33561242
Free PMC article.
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Introgression browser: high-throughput whole-genome SNP visualization.
Aflitos SA, Sanchez-Perez G, de Ridder D, Fransz P, Schranz ME, de Jong H, Peters SA.
Aflitos SA, et al.
Plant J. 2015 Apr;82(1):174-82. doi: 10.1111/tpj.12800.
Plant J. 2015.
PMID: 25704554
Free article.
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Distribution, position and genomic characteristics of crossovers in tomato recombinant inbred lines derived from an interspecific cross between Solanum lycopersicum and Solanum pimpinellifolium.
Demirci S, van Dijk AD, Sanchez Perez G, Aflitos SA, de Ridder D, Peters SA.
Demirci S, et al. Among authors: aflitos sa.
Plant J. 2017 Feb;89(3):554-564. doi: 10.1111/tpj.13406. Epub 2017 Feb 3.
Plant J. 2017.
PMID: 27797425
Free article.
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Molecular, genetic and evolutionary analysis of a paracentric inversion in Arabidopsis thaliana.
Fransz P, Linc G, Lee CR, Aflitos SA, Lasky JR, Toomajian C, Ali H, Peters J, van Dam P, Ji X, Kuzak M, Gerats T, Schubert I, Schneeberger K, Colot V, Martienssen R, Koornneef M, Nordborg M, Juenger TE, de Jong H, Schranz ME.
Fransz P, et al. Among authors: aflitos sa.
Plant J. 2016 Oct;88(2):159-178. doi: 10.1111/tpj.13262. Epub 2016 Sep 13.
Plant J. 2016.
PMID: 27436134
Free PMC article.
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Cnidaria: fast, reference-free clustering of raw and assembled genome and transcriptome NGS data.
Aflitos SA, Severing E, Sanchez-Perez G, Peters S, de Jong H, de Ridder D.
Aflitos SA, et al.
BMC Bioinformatics. 2015 Nov 2;16:352. doi: 10.1186/s12859-015-0806-7.
BMC Bioinformatics. 2015.
PMID: 26525298
Free PMC article.
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Tracing ancestor rice of Suriname Maroons back to its African origin.
van Andel TR, Meyer RS, Aflitos SA, Carney JA, Veltman MA, Copetti D, Flowers JM, Havinga RM, Maat H, Purugganan MD, Wing RA, Schranz ME.
van Andel TR, et al. Among authors: aflitos sa.
Nat Plants. 2016 Oct 3;2:16149. doi: 10.1038/nplants.2016.149.
Nat Plants. 2016.
PMID: 27694825
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