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Base-pairing requirement for RNA silencing by a bacterial small RNA and acceleration of duplex formation by Hfq.
Kawamoto H, Koide Y, Morita T, Aiba H. Kawamoto H, et al. Among authors: aiba h. Mol Microbiol. 2006 Aug;61(4):1013-22. doi: 10.1111/j.1365-2958.2006.05288.x. Epub 2006 Jul 12. Mol Microbiol. 2006. PMID: 16859494
Mechanism and physiological significance of autoregulation of the Escherichia coli hfq gene.
Morita T, Aiba H. Morita T, et al. Among authors: aiba h. RNA. 2019 Feb;25(2):264-276. doi: 10.1261/rna.068106.118. Epub 2018 Nov 28. RNA. 2019. PMID: 30487269 Free PMC article.
Role of the terminator hairpin in the biogenesis of functional Hfq-binding sRNAs.
Morita T, Nishino R, Aiba H. Morita T, et al. Among authors: aiba h. RNA. 2017 Sep;23(9):1419-1431. doi: 10.1261/rna.060756.117. Epub 2017 Jun 12. RNA. 2017. PMID: 28606943 Free PMC article.
Inhibition of Phagocytic Killing of Escherichia coli in Drosophila Hemocytes by RNA Chaperone Hfq.
Shiratsuchi A, Nitta M, Kuroda A, Komiyama C, Gawasawa M, Shimamoto N, Tuan TQ, Morita T, Aiba H, Nakanishi Y. Shiratsuchi A, et al. Among authors: aiba h. J Immunol. 2016 Aug 15;197(4):1298-307. doi: 10.4049/jimmunol.1501953. Epub 2016 Jun 29. J Immunol. 2016. PMID: 27357148
Insights into transcription termination of Hfq-binding sRNAs of Escherichia coli and characterization of readthrough products.
Morita T, Ueda M, Kubo K, Aiba H. Morita T, et al. Among authors: aiba h. RNA. 2015 Aug;21(8):1490-501. doi: 10.1261/rna.051870.115. Epub 2015 Jun 23. RNA. 2015. PMID: 26106215 Free PMC article.
Detection of sRNA-mRNA interactions by electrophoretic mobility shift assay.
Morita T, Maki K, Aiba H. Morita T, et al. Among authors: aiba h. Methods Mol Biol. 2012;905:235-44. doi: 10.1007/978-1-61779-949-5_15. Methods Mol Biol. 2012. PMID: 22736008
RNase E action at a distance: degradation of target mRNAs mediated by an Hfq-binding small RNA in bacteria.
Morita T, Aiba H. Morita T, et al. Among authors: aiba h. Genes Dev. 2011 Feb 15;25(4):294-8. doi: 10.1101/gad.2030311. Genes Dev. 2011. PMID: 21325130 Free PMC article.
PolyU tail of rho-independent terminator of bacterial small RNAs is essential for Hfq action.
Otaka H, Ishikawa H, Morita T, Aiba H. Otaka H, et al. Among authors: aiba h. Proc Natl Acad Sci U S A. 2011 Aug 9;108(32):13059-64. doi: 10.1073/pnas.1107050108. Epub 2011 Jul 25. Proc Natl Acad Sci U S A. 2011. PMID: 21788484 Free PMC article.
Analysis of nonstop mRNA translation in the absence of tmRNA in Escherichia coli.
Kuroha K, Horiguchi N, Aiba H, Inada T. Kuroha K, et al. Among authors: aiba h. Genes Cells. 2009 Jun;14(6):739-49. doi: 10.1111/j.1365-2443.2009.01304.x. Epub 2009 May 14. Genes Cells. 2009. PMID: 19469882
Photo-induced regulation of the chromatic adaptive gene expression by Anabaena sensory rhodopsin.
Irieda H, Morita T, Maki K, Homma M, Aiba H, Sudo Y. Irieda H, et al. Among authors: aiba h. J Biol Chem. 2012 Sep 21;287(39):32485-93. doi: 10.1074/jbc.M112.390864. Epub 2012 Aug 7. J Biol Chem. 2012. PMID: 22872645 Free PMC article.
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