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Ca2+ binding enhanced mechanical stability of an archaeal crystallin.
Ramanujam V, Kotamarthi HC, Ainavarapu SR. Ramanujam V, et al. Among authors: ainavarapu sr. PLoS One. 2014 Apr 11;9(4):e94513. doi: 10.1371/journal.pone.0094513. eCollection 2014. PLoS One. 2014. PMID: 24728085 Free PMC article.
Ligand binding modulates the mechanical stability of dihydrofolate reductase.
Ainavarapu SR, Li L, Badilla CL, Fernandez JM. Ainavarapu SR, et al. Biophys J. 2005 Nov;89(5):3337-44. doi: 10.1529/biophysj.105.062034. Epub 2005 Aug 12. Biophys J. 2005. PMID: 16100277 Free PMC article.
Ligand-modulated parallel mechanical unfolding pathways of maltose-binding proteins.
Aggarwal V, Kulothungan SR, Balamurali MM, Saranya SR, Varadarajan R, Ainavarapu SR. Aggarwal V, et al. Among authors: ainavarapu sr. J Biol Chem. 2011 Aug 12;286(32):28056-65. doi: 10.1074/jbc.M111.249045. Epub 2011 Jun 8. J Biol Chem. 2011. PMID: 21659518 Free PMC article.
Iterative cloning, overexpression, purification and isotopic labeling of an engineered dimer of a Ca(2+)-binding protein of the βγ-crystallin superfamily from Methanosarcina acetivorans.
Ramanujam V, Chary KV, Ainavarapu SR. Ramanujam V, et al. Among authors: ainavarapu sr. Protein Expr Purif. 2012 Jul;84(1):116-22. doi: 10.1016/j.pep.2012.04.024. Epub 2012 May 9. Protein Expr Purif. 2012. PMID: 22579642
Multiple unfolding pathways of leucine binding protein (LBP) probed by single-molecule force spectroscopy (SMFS).
Kotamarthi HC, Sharma R, Narayan S, Ray S, Ainavarapu SR. Kotamarthi HC, et al. Among authors: ainavarapu sr. J Am Chem Soc. 2013 Oct 2;135(39):14768-74. doi: 10.1021/ja406238q. Epub 2013 Sep 23. J Am Chem Soc. 2013. PMID: 24015877
Preventing disulfide bond formation weakens non-covalent forces among lysozyme aggregates.
Ravi VK, Goel M, Kotamarthi HC, Ainavarapu SR, Swaminathan R. Ravi VK, et al. Among authors: ainavarapu sr. PLoS One. 2014 Feb 14;9(2):e87012. doi: 10.1371/journal.pone.0087012. eCollection 2014. PLoS One. 2014. PMID: 24551048 Free PMC article.
Mechanical unfolding of ribose binding protein and its comparison with other periplasmic binding proteins.
Kotamarthi HC, Narayan S, Ainavarapu SR. Kotamarthi HC, et al. Among authors: ainavarapu sr. J Phys Chem B. 2014 Oct 2;118(39):11449-54. doi: 10.1021/jp507463q. Epub 2014 Sep 19. J Phys Chem B. 2014. PMID: 25216062
Significance of 1B and 2B domains in modulating elastic properties of lamin A.
Bera M, Ainavarapu SR, Sengupta K. Bera M, et al. Among authors: ainavarapu sr. Sci Rep. 2016 Jun 15;6:27879. doi: 10.1038/srep27879. Sci Rep. 2016. PMID: 27301336 Free PMC article.
Force Spectroscopy of the Plasmodium falciparum Vaccine Candidate Circumsporozoite Protein Suggests a Mechanically Pliable Repeat Region.
Patra AP, Sharma S, Ainavarapu SR. Patra AP, et al. Among authors: ainavarapu sr. J Biol Chem. 2017 Feb 10;292(6):2110-2119. doi: 10.1074/jbc.M116.754796. Epub 2016 Dec 27. J Biol Chem. 2017. PMID: 28031457 Free PMC article.
Differences in the mechanical unfolding pathways of apo- and copper-bound azurins.
Yadav A, Paul S, Venkatramani R, Ainavarapu SRK. Yadav A, et al. Among authors: ainavarapu srk. Sci Rep. 2018 Jan 31;8(1):1989. doi: 10.1038/s41598-018-19755-7. Sci Rep. 2018. PMID: 29386517 Free PMC article.
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