Aittokallio T - Search Results

1

Adrenals Contribute to Growth of Castration-Resistant VCaP Prostate Cancer Xenografts.

Huhtaniemi R, Oksala R, Knuuttila M, Mehmood A, Aho E, Laajala TD, Nicorici D, Aittokallio T, Laiho A, Elo L, Ohlsson C, Kallio P, Mäkelä S, Mustonen MVJ, Sipilä P, Poutanen M. Huhtaniemi R, et al. Among authors: aittokallio t. Am J Pathol. 2018 Dec;188(12):2890-2901. doi: 10.1016/j.ajpath.2018.07.029. Epub 2018 Sep 28. Am J Pathol. 2018. PMID: 30273606 Free article.

2

Integrating probe-level expression changes across generations of Affymetrix arrays.

Elo LL, Lahti L, Skottman H, Kyläniemi M, Lahesmaa R, Aittokallio T. Elo LL, et al. Among authors: aittokallio t. Nucleic Acids Res. 2005 Dec 14;33(22):e193. doi: 10.1093/nar/gni193. Nucleic Acids Res. 2005. PMID: 16356924 Free PMC article.

3

Improving missing value estimation in microarray data with gene ontology.

Tuikkala J, Elo L, Nevalainen OS, Aittokallio T. Tuikkala J, et al. Among authors: aittokallio t. Bioinformatics. 2006 Mar 1;22(5):566-72. doi: 10.1093/bioinformatics/btk019. Epub 2005 Dec 23. Bioinformatics. 2006. PMID: 16377613

4

Th1 response and cytotoxicity genes are down-regulated in cutaneous T-cell lymphoma.

Hahtola S, Tuomela S, Elo L, Häkkinen T, Karenko L, Nedoszytko B, Heikkilä H, Saarialho-Kere U, Roszkiewicz J, Aittokallio T, Lahesmaa R, Ranki A. Hahtola S, et al. Among authors: aittokallio t. Clin Cancer Res. 2006 Aug 15;12(16):4812-21. doi: 10.1158/1078-0432.CCR-06-0532. Clin Cancer Res. 2006. PMID: 16914566

5

Improving identification of differentially expressed genes by integrative analysis of Affymetrix and Illumina arrays.

Elo LL, Katajamaa M, Lund R, Oresic M, Lahesmaa R, Aittokallio T. Elo LL, et al. Among authors: aittokallio t. OMICS. 2006 Fall;10(3):369-80. doi: 10.1089/omi.2006.10.369. OMICS. 2006. PMID: 17069514

6

Systematic construction of gene coexpression networks with applications to human T helper cell differentiation process.

Elo LL, Järvenpää H, Oresic M, Lahesmaa R, Aittokallio T. Elo LL, et al. Among authors: aittokallio t. Bioinformatics. 2007 Aug 15;23(16):2096-103. doi: 10.1093/bioinformatics/btm309. Epub 2007 Jun 6. Bioinformatics. 2007. PMID: 17553854

7

Missing value imputation improves clustering and interpretation of gene expression microarray data.

Tuikkala J, Elo LL, Nevalainen OS, Aittokallio T. Tuikkala J, et al. Among authors: aittokallio t. BMC Bioinformatics. 2008 Apr 18;9:202. doi: 10.1186/1471-2105-9-202. BMC Bioinformatics. 2008. PMID: 18423022 Free PMC article.

8

Predicting quantitative genetic interactions by means of sequential matrix approximation.

Järvinen AP, Hiissa J, Elo LL, Aittokallio T. Järvinen AP, et al. Among authors: aittokallio t. PLoS One. 2008 Sep 26;3(9):e3284. doi: 10.1371/journal.pone.0003284. PLoS One. 2008. PMID: 18818762 Free PMC article.

9

Optimized detection of differential expression in global profiling experiments: case studies in clinical transcriptomic and quantitative proteomic datasets.

Elo LL, Hiissa J, Tuimala J, Kallio A, Korpelainen E, Aittokallio T. Elo LL, et al. Among authors: aittokallio t. Brief Bioinform. 2009 Sep;10(5):547-55. doi: 10.1093/bib/bbp033. Epub 2009 Jun 23. Brief Bioinform. 2009. PMID: 19549804 Review.

10

Probe-level estimation improves the detection of differential splicing in Affymetrix exon array studies.

Laajala E, Aittokallio T, Lahesmaa R, Elo LL. Laajala E, et al. Among authors: aittokallio t. Genome Biol. 2009;10(7):R77. doi: 10.1186/gb-2009-10-7-r77. Epub 2009 Jul 16. Genome Biol. 2009. PMID: 19607685 Free PMC article.

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