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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2006 2
2007 1
2008 1
2009 3
2010 3
2011 2
2012 4
2013 3
2014 5
2015 3
2017 6
2018 6
2019 9
2020 6
2021 4
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55 results
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Page 1
Predicting lethal courses in critically ill COVID-19 patients using a machine learning model trained on patients with non-COVID-19 viral pneumonia.
Lichtner G, Balzer F, Haufe S, Giesa N, Schiefenhövel F, Schmieding M, Jurth C, Kopp W, Akalin A, Schaller SJ, Weber-Carstens S, Spies C, von Dincklage F. Lichtner G, et al. Among authors: akalin a. Sci Rep. 2021 Jun 24;11(1):13205. doi: 10.1038/s41598-021-92475-7. Sci Rep. 2021. PMID: 34168198 Free PMC article.
Transcriptomic profiling of SARS-CoV-2 infected human cell lines identifies HSP90 as target for COVID-19 therapy.
Wyler E, Mösbauer K, Franke V, Diag A, Gottula LT, Arsiè R, Klironomos F, Koppstein D, Hönzke K, Ayoub S, Buccitelli C, Hoffmann K, Richter A, Legnini I, Ivanov A, Mari T, Del Giudice S, Papies J, Praktiknjo S, Meyer TF, Müller MA, Niemeyer D, Hocke A, Selbach M, Akalin A, Rajewsky N, Drosten C, Landthaler M. Wyler E, et al. Among authors: akalin a. iScience. 2021 Mar 19;24(3):102151. doi: 10.1016/j.isci.2021.102151. Epub 2021 Feb 6. iScience. 2021. PMID: 33585804 Free PMC article.
Transcriptional repression of NFKBIA triggers constitutive IKK- and proteasome-independent p65/RelA activation in senescence.
Kolesnichenko M, Mikuda N, Höpken UE, Kärgel E, Uyar B, Tufan AB, Milanovic M, Sun W, Krahn I, Schleich K, von Hoff L, Hinz M, Willenbrock M, Jungmann S, Akalin A, Lee S, Schmidt-Ullrich R, Schmitt CA, Scheidereit C. Kolesnichenko M, et al. Among authors: akalin a. EMBO J. 2021 Mar 15;40(6):e104296. doi: 10.15252/embj.2019104296. Epub 2021 Jan 18. EMBO J. 2021. PMID: 33459422 Free PMC article.
Single-cell analyses of aging, inflammation and senescence.
Uyar B, Palmer D, Kowald A, Murua Escobar H, Barrantes I, Möller S, Akalin A, Fuellen G. Uyar B, et al. Among authors: akalin a. Ageing Res Rev. 2020 Dec;64:101156. doi: 10.1016/j.arr.2020.101156. Epub 2020 Sep 16. Ageing Res Rev. 2020. PMID: 32949770 Free PMC article. Review.
Functional annotation of human long noncoding RNAs via molecular phenotyping.
Ramilowski JA, Yip CW, Agrawal S, Chang JC, Ciani Y, Kulakovskiy IV, Mendez M, Ooi JLC, Ouyang JF, Parkinson N, Petri A, Roos L, Severin J, Yasuzawa K, Abugessaisa I, Akalin A, Antonov IV, Arner E, Bonetti A, Bono H, Borsari B, Brombacher F, Cameron CJ, Cannistraci CV, Cardenas R, Cardon M, Chang H, Dostie J, Ducoli L, Favorov A, Fort A, Garrido D, Gil N, Gimenez J, Guler R, Handoko L, Harshbarger J, Hasegawa A, Hasegawa Y, Hashimoto K, Hayatsu N, Heutink P, Hirose T, Imada EL, Itoh M, Kaczkowski B, Kanhere A, Kawabata E, Kawaji H, Kawashima T, Kelly ST, Kojima M, Kondo N, Koseki H, Kouno T, Kratz A, Kurowska-Stolarska M, Kwon ATJ, Leek J, Lennartsson A, Lizio M, López-Redondo F, Luginbühl J, Maeda S, Makeev VJ, Marchionni L, Medvedeva YA, Minoda A, Müller F, Muñoz-Aguirre M, Murata M, Nishiyori H, Nitta KR, Noguchi S, Noro Y, Nurtdinov R, Okazaki Y, Orlando V, Paquette D, Parr CJC, Rackham OJL, Rizzu P, Sánchez Martinez DF, Sandelin A, Sanjana P, Semple CAM, Shibayama Y, Sivaraman DM, Suzuki T, Szumowski SC, Tagami M, Taylor MS, Terao C, Thodberg M, Thongjuea S, Tripathi V, Ulitsky I, Verardo R, Vorontsov IE, Yamamoto C, Young RS, Baillie JK, Forrest ARR, Guigó R, Hoffman MM, Hon CC, Kasukawa T, Kauppinen S, Kere J, Lenhard B, Schneider C, Suzuki H, Yagi K, de Hoon MJL, Shin JW, Carninci P. Ramilowski JA, et al. Among authors: akalin a. Genome Res. 2020 Jul;30(7):1060-1072. doi: 10.1101/gr.254219.119. Epub 2020 Jul 27. Genome Res. 2020. PMID: 32718982 Free PMC article.
Deep learning for genomics using Janggu.
Kopp W, Monti R, Tamburrini A, Ohler U, Akalin A. Kopp W, et al. Among authors: akalin a. Nat Commun. 2020 Jul 13;11(1):3488. doi: 10.1038/s41467-020-17155-y. Nat Commun. 2020. PMID: 32661261 Free PMC article.
PDGFA-associated protein 1 protects mature B lymphocytes from stress-induced cell death and promotes antibody gene diversification.
Delgado-Benito V, Berruezo-Llacuna M, Altwasser R, Winkler W, Sundaravinayagam D, Balasubramanian S, Caganova M, Graf R, Rahjouei A, Henke MT, Driesner M, Keller L, Prigione A, Janz M, Akalin A, Di Virgilio M. Delgado-Benito V, et al. Among authors: akalin a. J Exp Med. 2020 Oct 5;217(10):e20200137. doi: 10.1084/jem.20200137. J Exp Med. 2020. PMID: 32609329 Free PMC article.
Functional interplay of Epstein-Barr virus oncoproteins in a mouse model of B cell lymphomagenesis.
Sommermann T, Yasuda T, Ronen J, Wirtz T, Weber T, Sack U, Caeser R, Zhang J, Li X, Chu VT, Jauch A, Unger K, Hodson DJ, Akalin A, Rajewsky K. Sommermann T, et al. Among authors: akalin a. Proc Natl Acad Sci U S A. 2020 Jun 23;117(25):14421-14432. doi: 10.1073/pnas.1921139117. Epub 2020 Jun 10. Proc Natl Acad Sci U S A. 2020. PMID: 32522871 Free PMC article.
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