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Comprehensive primer design for analysis of population genetics in non-sequenced organisms.
Tezuka A, Matsushima N, Nemoto Y, Akashi HD, Kawata M, Makino T. Tezuka A, et al. PLoS One. 2012;7(2):e32314. doi: 10.1371/journal.pone.0032314. Epub 2012 Feb 24. PLoS One. 2012. PMID: 22393396 Free PMC article.
Weak selection and protein evolution.
Akashi H, Osada N, Ohta T. Akashi H, et al. Genetics. 2012 Sep;192(1):15-31. doi: 10.1534/genetics.112.140178. Genetics. 2012. PMID: 22964835 Free PMC article. Review.
Molecular evolution in the Drosophila melanogaster species subgroup: frequent parameter fluctuations on the timescale of molecular divergence.
Akashi H, Ko WY, Piao S, John A, Goel P, Lin CF, Vitins AP. Akashi H, et al. Genetics. 2006 Mar;172(3):1711-26. doi: 10.1534/genetics.105.049676. Epub 2005 Dec 30. Genetics. 2006. PMID: 16387879 Free PMC article.
Molecular phylogeny of the Drosophila melanogaster species subgroup.
Ko WY, David RM, Akashi H. Ko WY, et al. J Mol Evol. 2003 Nov;57(5):562-73. doi: 10.1007/s00239-003-2510-x. J Mol Evol. 2003. PMID: 14738315
Distinguishing Among Evolutionary Forces Acting on Genome-Wide Base Composition: Computer Simulation Analysis of Approximate Methods for Inferring Site Frequency Spectra of Derived Mutations.
Matsumoto T, Akashi H. Matsumoto T, et al. G3 (Bethesda). 2018 May 4;8(5):1755-1769. doi: 10.1534/g3.117.300512. G3 (Bethesda). 2018. PMID: 29588382 Free PMC article.
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