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It is all about the solvent: on the importance of the mobile phase for ZIC-HILIC glycopeptide enrichment.
Alagesan K, Khilji SK, Kolarich D. Alagesan K, et al. Anal Bioanal Chem. 2017 Jan;409(2):529-538. doi: 10.1007/s00216-016-0051-6. Epub 2016 Dec 1. Anal Bioanal Chem. 2017. PMID: 27909778 Free PMC article.
Isomer-Specific Analysis of Released N-Glycans by LC-ESI MS/MS with Porous Graphitized Carbon.
Kolarich D, Windwarder M, Alagesan K, Altmann F. Kolarich D, et al. Among authors: alagesan k. Methods Mol Biol. 2015;1321:427-35. doi: 10.1007/978-1-4939-2760-9_29. Methods Mol Biol. 2015. PMID: 26082239
Glycan size and attachment site location affect electron transfer dissociation (ETD) fragmentation and automated glycopeptide identification.
Alagesan K, Hinneburg H, Seeberger PH, Silva DV, Kolarich D. Alagesan K, et al. Glycoconj J. 2019 Dec;36(6):487-493. doi: 10.1007/s10719-019-09888-w. Epub 2019 Oct 21. Glycoconj J. 2019. PMID: 31637569
Production of glycosylated soluble amyloid precursor protein alpha (sAPPalpha) in Leishmania tarentolae.
Klatt S, Rohe M, Alagesan K, Kolarich D, Konthur Z, Hartl D. Klatt S, et al. Among authors: alagesan k. J Proteome Res. 2013 Jan 4;12(1):396-403. doi: 10.1021/pr300693f. Epub 2012 Dec 21. J Proteome Res. 2013. PMID: 23214446
Validation of the curation pipeline of UniCarb-DB: building a global glycan reference MS/MS repository.
Campbell MP, Nguyen-Khuong T, Hayes CA, Flowers SA, Alagesan K, Kolarich D, Packer NH, Karlsson NG. Campbell MP, et al. Among authors: alagesan k. Biochim Biophys Acta. 2014 Jan;1844(1 Pt A):108-16. doi: 10.1016/j.bbapap.2013.04.018. Epub 2013 Apr 25. Biochim Biophys Acta. 2014. PMID: 23624262
Exploring the Glycans of Euglena gracilis.
O'Neill EC, Kuhaudomlarp S, Rejzek M, Fangel JU, Alagesan K, Kolarich D, Willats WGT, Field RA. O'Neill EC, et al. Among authors: alagesan k. Biology (Basel). 2017 Dec 15;6(4):45. doi: 10.3390/biology6040045. Biology (Basel). 2017. PMID: 29244725 Free PMC article.
Isomeric Separation and Characterisation of Glycoconjugates.
Alagesan K, Everest-Dass A, Kolarich D. Alagesan K, et al. Adv Exp Med Biol. 2018;1104:77-99. doi: 10.1007/978-981-13-2158-0_5. Adv Exp Med Biol. 2018. PMID: 30484245 Review.
Improved strategy for large scale isolation of sialylglycopeptide (SGP) from egg yolk powder.
Alagesan K, Kolarich D. Alagesan K, et al. MethodsX. 2019 Apr 9;6:773-778. doi: 10.1016/j.mex.2019.04.007. eCollection 2019. MethodsX. 2019. PMID: 31016140 Free PMC article.
NIST Interlaboratory Study on Glycosylation Analysis of Monoclonal Antibodies: Comparison of Results from Diverse Analytical Methods.
De Leoz MLA, Duewer DL, Fung A, Liu L, Yau HK, Potter O, Staples GO, Furuki K, Frenkel R, Hu Y, Sosic Z, Zhang P, Altmann F, Gru Nwald-Grube C, Shao C, Zaia J, Evers W, Pengelley S, Suckau D, Wiechmann A, Resemann A, Jabs W, Beck A, Froehlich JW, Huang C, Li Y, Liu Y, Sun S, Wang Y, Seo Y, An HJ, Reichardt NC, Ruiz JE, Archer-Hartmann S, Azadi P, Bell L, Lakos Z, An Y, Cipollo JF, Pucic-Bakovic M, Štambuk J, Lauc G, Li X, Wang PG, Bock A, Hennig R, Rapp E, Creskey M, Cyr TD, Nakano M, Sugiyama T, Leung PA, Link-Lenczowski P, Jaworek J, Yang S, Zhang H, Kelly T, Klapoetke S, Cao R, Kim JY, Lee HK, Lee JY, Yoo JS, Kim SR, Suh SK, de Haan N, Falck D, Lageveen-Kammeijer GSM, Wuhrer M, Emery RJ, Kozak RP, Liew LP, Royle L, Urbanowicz PA, Packer NH, Song X, Everest-Dass A, Lattová E, Cajic S, Alagesan K, Kolarich D, Kasali T, Lindo V, Chen Y, Goswami K, Gau B, Amunugama R, Jones R, Stroop CJM, Kato K, Yagi H, Kondo S, Yuen CT, Harazono A, Shi X, Magnelli PE, Kasper BT, Mahal L, Harvey DJ, O'Flaherty R, Rudd PM, Saldova R, Hecht ES, Muddiman DC, Kang J, Bhoskar P, Menard D, Saati A, Merle C, Mast S, Tep S, Truong J, Nishikaze T, Sekiya S, Shafer A, Funaoka S, Toyoda M, de Vreugd P, Caron C, Pradhan P, Tan NC, Mechref Y, Patil S, Rohrer JS, Chakrabarti R, Dadke D, Lahori M, Zou C, Cairo C, Reiz B, Whittal RM, Lebrilla CB, Wu L, Guttman A, Szigeti M, Kremkow BG, Lee KH, Sihlbom C, Adamczyk B, Jin C, Karlsson NG, Örnros J, Larson G, Nilsson J, Meyer B, Wiegandt A, Komatsu E, Perreault H, Bodnar ED, Said N, Francois YN, Leize-Wagner E, Maier S, Zeck A, Heck AJR, Yang Y, Haselberg R, Yu YQ, Alley W, Leone JW, Yuan H, Stein SE. De Leoz MLA, et al. Among authors: alagesan k. Mol Cell Proteomics. 2020 Jan;19(1):11-30. doi: 10.1074/mcp.RA119.001677. Epub 2019 Oct 7. Mol Cell Proteomics. 2020. PMID: 31591262 Free PMC article.
Disrupted intracellular redox balance of the diplomonad fish parasite Spironucleus vortens by 5-nitroimidazoles and garlic-derived compounds.
Williams CF, Lloyd D, Kolarich D, Alagesan K, Duchêne M, Cable J, Williams D, Leitsch D. Williams CF, et al. Among authors: alagesan k. Vet Parasitol. 2012 Nov 23;190(1-2):62-73. doi: 10.1016/j.vetpar.2012.05.011. Epub 2012 May 19. Vet Parasitol. 2012. PMID: 22677132
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