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Page 1
Community-driven roadmap for integrated disease maps.
Ostaszewski M, Gebel S, Kuperstein I, Mazein A, Zinovyev A, Dogrusoz U, Hasenauer J, Fleming RMT, Le Novère N, Gawron P, Ligon T, Niarakis A, Nickerson D, Weindl D, Balling R, Barillot E, Auffray C, Schneider R. Ostaszewski M, et al. Among authors: mazein a. Brief Bioinform. 2019 Mar 25;20(2):659-670. doi: 10.1093/bib/bby024. Brief Bioinform. 2019. PMID: 29688273 Free PMC article. Review.
AsthmaMap: An interactive knowledge repository for mechanisms of asthma.
Mazein A, Ivanova O, Balaur I, Ostaszewski M, Berzhitskaya V, Serebriyskaya T, Ligon T, Hasenauer J, De Meulder B, Overall RW, Roy L, Knowles RG, Wheelock CE, Dahlen SE, Chung KF, Adcock IM, Roberts G, Djukanovic R, Pellet J, Gawron P, Balling R, Maitland-van der Zee AH, Schneider R, Sterk PJ, Auffray C; U-BIOPRED Study Group,; eTRIKS Consortium. Mazein A, et al. J Allergy Clin Immunol. 2021 Mar;147(3):853-856. doi: 10.1016/j.jaci.2020.11.032. Epub 2020 Dec 9. J Allergy Clin Immunol. 2021. PMID: 33309742 No abstract available.
GraphML-SBGN bidirectional converter for metabolic networks.
Balaur I, Roy L, Touré V, Mazein A, Auffray C. Balaur I, et al. Among authors: mazein a. J Integr Bioinform. 2022 Dec 26;19(4):20220030. doi: 10.1515/jib-2022-0030. eCollection 2022 Dec 1. J Integr Bioinform. 2022. PMID: 36563404 Free PMC article.
Graph databases in systems biology: a systematic review.
Mazein I, Rougny A, Mazein A, Henkel R, Gütebier L, Michaelis L, Ostaszewski M, Schneider R, Satagopam V, Jensen LJ, Waltemath D, Wodke JAH, Balaur I. Mazein I, et al. Among authors: mazein a. Brief Bioinform. 2024 Sep 23;25(6):bbae561. doi: 10.1093/bib/bbae561. Brief Bioinform. 2024. PMID: 39565895 Free PMC article.
Upper respiratory tract mucosal immunity for SARS-CoV-2 vaccines.
Fraser R, Orta-Resendiz A, Mazein A, Dockrell DH. Fraser R, et al. Among authors: mazein a. Trends Mol Med. 2023 Apr;29(4):255-267. doi: 10.1016/j.molmed.2023.01.003. Epub 2023 Jan 23. Trends Mol Med. 2023. PMID: 36764906 Free PMC article. Review.
CyFi-MAP: an interactive pathway-based resource for cystic fibrosis.
Pereira C, Mazein A, Farinha CM, Gray MA, Kunzelmann K, Ostaszewski M, Balaur I, Amaral MD, Falcao AO. Pereira C, et al. Among authors: mazein a. Sci Rep. 2021 Nov 15;11(1):22223. doi: 10.1038/s41598-021-01618-3. Sci Rep. 2021. PMID: 34782688 Free PMC article.
Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches.
Niarakis A, Ostaszewski M, Mazein A, Kuperstein I, Kutmon M, Gillespie ME, Funahashi A, Acencio ML, Hemedan A, Aichem M, Klein K, Czauderna T, Burtscher F, Yamada TG, Hiki Y, Hiroi NF, Hu F, Pham N, Ehrhart F, Willighagen EL, Valdeolivas A, Dugourd A, Messina F, Esteban-Medina M, Peña-Chilet M, Rian K, Soliman S, Aghamiri SS, Puniya BL, Naldi A, Helikar T, Singh V, Fernández MF, Bermudez V, Tsirvouli E, Montagud A, Noël V, Ponce-de-Leon M, Maier D, Bauch A, Gyori BM, Bachman JA, Luna A, Piñero J, Furlong LI, Balaur I, Rougny A, Jarosz Y, Overall RW, Phair R, Perfetto L, Matthews L, Rex DAB, Orlic-Milacic M, Gomez LCM, De Meulder B, Ravel JM, Jassal B, Satagopam V, Wu G, Golebiewski M, Gawron P, Calzone L, Beckmann JS, Evelo CT, D'Eustachio P, Schreiber F, Saez-Rodriguez J, Dopazo J, Kuiper M, Valencia A, Wolkenhauer O, Kitano H, Barillot E, Auffray C, Balling R, Schneider R; COVID-19 Disease Map Community. Niarakis A, et al. Among authors: mazein a. Front Immunol. 2024 Feb 13;14:1282859. doi: 10.3389/fimmu.2023.1282859. eCollection 2023. Front Immunol. 2024. PMID: 38414974 Free PMC article.
44 results