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DIANA-microT web server: elucidating microRNA functions through target prediction.
Maragkakis M, Reczko M, Simossis VA, Alexiou P, Papadopoulos GL, Dalamagas T, Giannopoulos G, Goumas G, Koukis E, Kourtis K, Vergoulis T, Koziris N, Sellis T, Tsanakas P, Hatzigeorgiou AG. Maragkakis M, et al. Among authors: alexiou p. Nucleic Acids Res. 2009 Jul;37(Web Server issue):W273-6. doi: 10.1093/nar/gkp292. Epub 2009 Apr 30. Nucleic Acids Res. 2009. PMID: 19406924 Free PMC article.
DIANA-mirPath: Integrating human and mouse microRNAs in pathways.
Papadopoulos GL, Alexiou P, Maragkakis M, Reczko M, Hatzigeorgiou AG. Papadopoulos GL, et al. Among authors: alexiou p. Bioinformatics. 2009 Aug 1;25(15):1991-3. doi: 10.1093/bioinformatics/btp299. Epub 2009 May 12. Bioinformatics. 2009. PMID: 19435746
Accurate microRNA target prediction correlates with protein repression levels.
Maragkakis M, Alexiou P, Papadopoulos GL, Reczko M, Dalamagas T, Giannopoulos G, Goumas G, Koukis E, Kourtis K, Simossis VA, Sethupathy P, Vergoulis T, Koziris N, Sellis T, Tsanakas P, Hatzigeorgiou AG. Maragkakis M, et al. Among authors: alexiou p. BMC Bioinformatics. 2009 Sep 18;10:295. doi: 10.1186/1471-2105-10-295. BMC Bioinformatics. 2009. PMID: 19765283 Free PMC article.
miRGen 2.0: a database of microRNA genomic information and regulation.
Alexiou P, Vergoulis T, Gleditzsch M, Prekas G, Dalamagas T, Megraw M, Grosse I, Sellis T, Hatzigeorgiou AG. Alexiou P, et al. Nucleic Acids Res. 2010 Jan;38(Database issue):D137-41. doi: 10.1093/nar/gkp888. Epub 2009 Oct 22. Nucleic Acids Res. 2010. PMID: 19850714 Free PMC article.
In vivo profiling of hypoxic gene expression in gliomas using the hypoxia marker EF5 and laser-capture microdissection.
Marotta D, Karar J, Jenkins WT, Kumanova M, Jenkins KW, Tobias JW, Baldwin D, Hatzigeorgiou A, Alexiou P, Evans SM, Alarcon R, Maity A, Koch C, Koumenis C. Marotta D, et al. Among authors: alexiou p. Cancer Res. 2011 Feb 1;71(3):779-89. doi: 10.1158/0008-5472.CAN-10-3061. Epub 2011 Jan 25. Cancer Res. 2011. PMID: 21266355 Free PMC article.
TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support.
Vergoulis T, Vlachos IS, Alexiou P, Georgakilas G, Maragkakis M, Reczko M, Gerangelos S, Koziris N, Dalamagas T, Hatzigeorgiou AG. Vergoulis T, et al. Among authors: alexiou p. Nucleic Acids Res. 2012 Jan;40(Database issue):D222-9. doi: 10.1093/nar/gkr1161. Epub 2011 Dec 1. Nucleic Acids Res. 2012. PMID: 22135297 Free PMC article.
Functional microRNA targets in protein coding sequences.
Reczko M, Maragkakis M, Alexiou P, Grosse I, Hatzigeorgiou AG. Reczko M, et al. Among authors: alexiou p. Bioinformatics. 2012 Mar 15;28(6):771-6. doi: 10.1093/bioinformatics/bts043. Epub 2012 Jan 27. Bioinformatics. 2012. PMID: 22285563
60 results