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Transcriptional Responses to IFN-γ Require Mediator Kinase-Dependent Pause Release and Mechanistically Distinct CDK8 and CDK19 Functions.
Steinparzer I, Sedlyarov V, Rubin JD, Eislmayr K, Galbraith MD, Levandowski CB, Vcelkova T, Sneezum L, Wascher F, Amman F, Kleinova R, Bender H, Andrysik Z, Espinosa JM, Superti-Furga G, Dowell RD, Taatjes DJ, Kovarik P. Steinparzer I, et al. Among authors: amman f. Mol Cell. 2019 Nov 7;76(3):485-499.e8. doi: 10.1016/j.molcel.2019.07.034. Epub 2019 Sep 5. Mol Cell. 2019. PMID: 31495563 Free PMC article.
MSF: Modulated Sub-graph Finder.
Farman MR, Hofacker IL, Amman F. Farman MR, et al. Among authors: amman f. F1000Res. 2018 Aug 29;7:1346. doi: 10.12688/f1000research.16005.3. eCollection 2018. F1000Res. 2018. PMID: 30984370 Free PMC article.
Dual RNA-seq unveils noncoding RNA functions in host-pathogen interactions.
Westermann AJ, Förstner KU, Amman F, Barquist L, Chao Y, Schulte LN, Müller L, Reinhardt R, Stadler PF, Vogel J. Westermann AJ, et al. Among authors: amman f. Nature. 2016 Jan 28;529(7587):496-501. doi: 10.1038/nature16547. Epub 2016 Jan 20. Nature. 2016. PMID: 26789254
iRAPs curb antisense transcription in E. coli.
Magán A, Amman F, El-Isa F, Hartl N, Shamovsky I, Nudler E, Schroeder R, Sedlyarova N. Magán A, et al. Among authors: amman f. Nucleic Acids Res. 2019 Nov 18;47(20):10894-10905. doi: 10.1093/nar/gkz791. Nucleic Acids Res. 2019. PMID: 31535128 Free PMC article.
Impact of Hfq on the Bacillus subtilis transcriptome.
Hämmerle H, Amman F, Večerek B, Stülke J, Hofacker I, Bläsi U. Hämmerle H, et al. Among authors: amman f. PLoS One. 2014 Jun 16;9(6):e98661. doi: 10.1371/journal.pone.0098661. eCollection 2014. PLoS One. 2014. PMID: 24932523 Free PMC article.
Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells.
Hölzer M, Krähling V, Amman F, Barth E, Bernhart SH, Carmelo VA, Collatz M, Doose G, Eggenhofer F, Ewald J, Fallmann J, Feldhahn LM, Fricke M, Gebauer J, Gruber AJ, Hufsky F, Indrischek H, Kanton S, Linde J, Mostajo N, Ochsenreiter R, Riege K, Rivarola-Duarte L, Sahyoun AH, Saunders SJ, Seemann SE, Tanzer A, Vogel B, Wehner S, Wolfinger MT, Backofen R, Gorodkin J, Grosse I, Hofacker I, Hoffmann S, Kaleta C, Stadler PF, Becker S, Marz M. Hölzer M, et al. Among authors: amman f. Sci Rep. 2016 Oct 7;6:34589. doi: 10.1038/srep34589. Sci Rep. 2016. PMID: 27713552 Free PMC article.
51 results