Andreeva A - Search Results

1

SCOP database in 2004: refinements integrate structure and sequence family data.

Andreeva A, Howorth D, Brenner SE, Hubbard TJ, Chothia C, Murzin AG. Andreeva A, et al. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D226-9. doi: 10.1093/nar/gkh039. Nucleic Acids Res. 2004. PMID: 14681400 Free PMC article.

2

Revised structure of the AbrB N-terminal domain unifies a diverse superfamily of putative DNA-binding proteins.

Bobay BG, Andreeva A, Mueller GA, Cavanagh J, Murzin AG. Bobay BG, et al. Among authors: andreeva a. FEBS Lett. 2005 Oct 24;579(25):5669-74. doi: 10.1016/j.febslet.2005.09.045. Epub 2005 Oct 4. FEBS Lett. 2005. PMID: 16223496 Free article.

3

Evolution of protein fold in the presence of functional constraints.

Andreeva A, Murzin AG. Andreeva A, et al. Curr Opin Struct Biol. 2006 Jun;16(3):399-408. doi: 10.1016/j.sbi.2006.04.003. Epub 2006 May 2. Curr Opin Struct Biol. 2006. PMID: 16650981 Review.

4

SISYPHUS--structural alignments for proteins with non-trivial relationships.

Andreeva A, Prlić A, Hubbard TJ, Murzin AG. Andreeva A, et al. Nucleic Acids Res. 2007 Jan;35(Database issue):D253-9. doi: 10.1093/nar/gkl746. Epub 2006 Oct 26. Nucleic Acids Res. 2007. PMID: 17068077 Free PMC article.

5

Data growth and its impact on the SCOP database: new developments.

Andreeva A, Howorth D, Chandonia JM, Brenner SE, Hubbard TJ, Chothia C, Murzin AG. Andreeva A, et al. Nucleic Acids Res. 2008 Jan;36(Database issue):D419-25. doi: 10.1093/nar/gkm993. Epub 2007 Nov 13. Nucleic Acids Res. 2008. PMID: 18000004 Free PMC article.

6

A fortuitous insight into a common mode of RNA recognition by the dsRNA-specific zinc fingers.

Andreeva A, Murzin AG. Andreeva A, et al. Proc Natl Acad Sci U S A. 2008 Dec 30;105(52):E128-9. doi: 10.1073/pnas.0810994106. Proc Natl Acad Sci U S A. 2008. PMID: 19116284 Free PMC article. No abstract available.

7

Biophysical characterizations of human mitochondrial transcription factor A and its binding to tumor suppressor p53.

Wong TS, Rajagopalan S, Freund SM, Rutherford TJ, Andreeva A, Townsley FM, Petrovich M, Fersht AR. Wong TS, et al. Among authors: andreeva a. Nucleic Acids Res. 2009 Nov;37(20):6765-83. doi: 10.1093/nar/gkp750. Epub 2009 Sep 15. Nucleic Acids Res. 2009. PMID: 19755502 Free PMC article.

8

Structural classification of proteins and structural genomics: new insights into protein folding and evolution.

Andreeva A, Murzin AG. Andreeva A, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Oct 1;66(Pt 10):1190-7. doi: 10.1107/S1744309110007177. Epub 2010 Jul 6. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010. PMID: 20944210 Free PMC article. Review.

9

Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains.

Lewis TE, Sillitoe I, Andreeva A, Blundell TL, Buchan DW, Chothia C, Cuff A, Dana JM, Filippis I, Gough J, Hunter S, Jones DT, Kelley LA, Kleywegt GJ, Minneci F, Mitchell A, Murzin AG, Ochoa-Montaño B, Rackham OJ, Smith J, Sternberg MJ, Velankar S, Yeats C, Orengo C. Lewis TE, et al. Among authors: andreeva a. Nucleic Acids Res. 2013 Jan;41(Database issue):D499-507. doi: 10.1093/nar/gks1266. Epub 2012 Nov 30. Nucleic Acids Res. 2013. PMID: 23203986 Free PMC article.

10

SCOP2 prototype: a new approach to protein structure mining.

Andreeva A, Howorth D, Chothia C, Kulesha E, Murzin AG. Andreeva A, et al. Nucleic Acids Res. 2014 Jan;42(Database issue):D310-4. doi: 10.1093/nar/gkt1242. Epub 2013 Nov 29. Nucleic Acids Res. 2014. PMID: 24293656 Free PMC article.

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