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The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes.
Angly FE, Willner D, Prieto-Davó A, Edwards RA, Schmieder R, Vega-Thurber R, Antonopoulos DA, Barott K, Cottrell MT, Desnues C, Dinsdale EA, Furlan M, Haynes M, Henn MR, Hu Y, Kirchman DL, McDole T, McPherson JD, Meyer F, Miller RM, Mundt E, Naviaux RK, Rodriguez-Mueller B, Stevens R, Wegley L, Zhang L, Zhu B, Rohwer F. Angly FE, et al. Among authors: antonopoulos da. PLoS Comput Biol. 2009 Dec;5(12):e1000593. doi: 10.1371/journal.pcbi.1000593. Epub 2009 Dec 11. PLoS Comput Biol. 2009. PMID: 20011103 Free PMC article.
The complete genome sequence for putative H₂- and S-oxidizer Candidatus Sulfuricurvum sp., assembled de novo from an aquifer-derived metagenome.
Handley KM, Bartels D, O'Loughlin EJ, Williams KH, Trimble WL, Skinner K, Gilbert JA, Desai N, Glass EM, Paczian T, Wilke A, Antonopoulos D, Kemner KM, Meyer F. Handley KM, et al. Environ Microbiol. 2014 Nov;16(11):3443-62. doi: 10.1111/1462-2920.12453. Epub 2014 Apr 21. Environ Microbiol. 2014. PMID: 24628880
Maternal activation of gap genes in the hover fly Episyrphus.
Lemke S, Busch SE, Antonopoulos DA, Meyer F, Domanus MH, Schmidt-Ott U. Lemke S, et al. Among authors: antonopoulos da. Development. 2010 May;137(10):1709-19. doi: 10.1242/dev.046649. Development. 2010. PMID: 20430746
Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases.
Brulc JM, Antonopoulos DA, Miller ME, Wilson MK, Yannarell AC, Dinsdale EA, Edwards RE, Frank ED, Emerson JB, Wacklin P, Coutinho PM, Henrissat B, Nelson KE, White BA. Brulc JM, et al. Among authors: antonopoulos da. Proc Natl Acad Sci U S A. 2009 Feb 10;106(6):1948-53. doi: 10.1073/pnas.0806191105. Epub 2009 Jan 30. Proc Natl Acad Sci U S A. 2009. PMID: 19181843 Free PMC article.
61 results