Anushree Chatterjee - Search Results

Year	Number of Results
2008	1
2011	6
2012	2
2013	3
2014	3
2015	6
2016	5
2017	10
2018	9
2019	6
2020	1
2021	8
2022	4
2023	7
2024	12
2025	2

1

A high-throughput anaerobic method for viability assays.

El-Fateh M, Meyer CT, Chatterjee A, Zhao X. El-Fateh M, et al. Among authors: chatterjee a. Microbiol Spectr. 2025 Apr;13(4):e0270624. doi: 10.1128/spectrum.02706-24. Epub 2025 Mar 5. Microbiol Spectr. 2025. PMID: 40042303 Free PMC article.

2

Suppression of NF-κB/NLRP3 by nanoligomer therapy mitigates ethanol and advanced age-related neuroinflammation.

Anton PE, Twardy S, Nagpal P, Moreno JA, Burchill MA, Chatterjee A, Busquet N, Mesches M, Kovacs EJ, McCullough RL. Anton PE, et al. Among authors: chatterjee a. J Leukoc Biol. 2025 Apr 23;117(4):qiaf024. doi: 10.1093/jleuko/qiaf024. J Leukoc Biol. 2025. PMID: 40036603

3

Large- and Small-Animal Studies of Safety, Pharmacokinetics, and Biodistribution of Inflammasome-Targeting Nanoligomer in the Brain and Other Target Organs.

Risen S, Sharma S, Gilberto VS, Brindley S, Aguilar M, Brown JM, Chatterjee A, Moreno JA, Nagpal P. Risen S, et al. Among authors: chatterjee a. ACS Pharmacol Transl Sci. 2024 Mar 21;7(11):3439-3451. doi: 10.1021/acsptsci.4c00068. eCollection 2024 Nov 8. ACS Pharmacol Transl Sci. 2024. PMID: 39539269 Free PMC article.

4

Microbiome- and Host Inflammasome-Targeting Inhibitor Nanoligomers Are Therapeutic in the Murine Colitis Model.

Sharma S, Gilberto VS, Levens CL, Chatterjee A, Kuhn KA, Nagpal P. Sharma S, et al. Among authors: chatterjee a. ACS Pharmacol Transl Sci. 2024 Aug 30;7(9):2677-2693. doi: 10.1021/acsptsci.4c00102. eCollection 2024 Sep 13. ACS Pharmacol Transl Sci. 2024. PMID: 39296260

5

Inflammasome-Inhibiting Nanoligomers Are Neuroprotective against Space-Induced Pathology in Healthy and Diseased Three-Dimensional Human Motor and Prefrontal Cortex Brain Organoids.

Sharma S, Gilberto VS, Rask J, Chatterjee A, Nagpal P. Sharma S, et al. Among authors: chatterjee a. ACS Chem Neurosci. 2024 Aug 21;15(16):3009-3021. doi: 10.1021/acschemneuro.4c00160. Epub 2024 Jul 31. ACS Chem Neurosci. 2024. PMID: 39084211

6

Nanoligomers targeting NF-κB and NLRP3 reduce neuroinflammation and improve cognitive function with aging and tauopathy.

Wahl D, Risen SJ, Osburn SC, Emge T, Sharma S, Gilberto VS, Chatterjee A, Nagpal P, Moreno JA, LaRocca TJ. Wahl D, et al. Among authors: chatterjee a. J Neuroinflammation. 2024 Jul 27;21(1):182. doi: 10.1186/s12974-024-03182-9. J Neuroinflammation. 2024. PMID: 39068433 Free PMC article.

7

Targeted-Neuroinflammation Mitigation Using Inflammasome-Inhibiting Nanoligomers is Therapeutic in an Experimental Autoimmune Encephalomyelitis Mouse Model.

Sharma S, Risen S, Gilberto VS, Boland S, Chatterjee A, Moreno JA, Nagpal P. Sharma S, et al. Among authors: chatterjee a. ACS Chem Neurosci. 2024 Apr 3;15(7):1596-1608. doi: 10.1021/acschemneuro.4c00024. Epub 2024 Mar 25. ACS Chem Neurosci. 2024. PMID: 38526238

8

Targeting Neuroinflammation by Pharmacologic Downregulation of Inflammatory Pathways Is Neuroprotective in Protein Misfolding Disorders.

Risen SJ, Boland SW, Sharma S, Weisman GM, Shirley PM, Latham AS, Hay AJD, Gilberto VS, Hines AD, Brindley S, Brown JM, McGrath S, Chatterjee A, Nagpal P, Moreno JA. Risen SJ, et al. Among authors: chatterjee a. ACS Chem Neurosci. 2024 Apr 3;15(7):1533-1547. doi: 10.1021/acschemneuro.3c00846. Epub 2024 Mar 20. ACS Chem Neurosci. 2024. PMID: 38507813

9

NF-κB/NLRP3 Translational Inhibition by Nanoligomer Therapy Mitigates Ethanol and Advanced Age-Related Neuroinflammation.

Anton PE, Nagpal P, Moreno J, Burchill MA, Chatterjee A, Busquet N, Mesches M, Kovacs EJ, McCullough RL. Anton PE, et al. Among authors: chatterjee a. bioRxiv [Preprint]. 2024 Feb 28:2024.02.26.582114. doi: 10.1101/2024.02.26.582114. bioRxiv. 2024. Update in: J Leukoc Biol. 2025 Apr 23;117(4):qiaf024. doi: 10.1093/jleuko/qiaf024. PMID: 38464118 Free PMC article. Updated. Preprint.

10

Modeling ionizing radiation-induced cardiovascular dysfunction with human iPSC-derived engineered heart tissues.

Cao X, Thomas D, Whitcomb LA, Wang M, Chatterjee A, Chicco AJ, Weil MM, Wu JC. Cao X, et al. Among authors: chatterjee a. J Mol Cell Cardiol. 2024 Mar;188:105-107. doi: 10.1016/j.yjmcc.2023.11.012. Epub 2024 Feb 29. J Mol Cell Cardiol. 2024. PMID: 38431383 Free PMC article. No abstract available.

11

Nanoligomers targeting NF-κB and NLRP3 reduce neuroinflammation and improve cognitive function with aging and tauopathy.

Wahl D, Risen SJ, Osburn SC, Emge T, Sharma S, Gilberto VS, Chatterjee A, Nagpal P, Moreno JA, LaRocca TJ. Wahl D, et al. Among authors: chatterjee a. bioRxiv [Preprint]. 2024 Jun 4:2024.02.03.578493. doi: 10.1101/2024.02.03.578493. bioRxiv. 2024. Update in: J Neuroinflammation. 2024 Jul 27;21(1):182. doi: 10.1186/s12974-024-03182-9. PMID: 38370618 Free PMC article. Updated. Preprint.

12

A systematic review of peptide nucleic acids (PNAs) with antibacterial activities: Efficacy, potential and challenges.

El-Fateh M, Chatterjee A, Zhao X. El-Fateh M, et al. Among authors: chatterjee a. Int J Antimicrob Agents. 2024 Mar;63(3):107083. doi: 10.1016/j.ijantimicag.2024.107083. Epub 2024 Jan 5. Int J Antimicrob Agents. 2024. PMID: 38185398 Free article. Review.

13

Cell-Penetrating Peptide Delivery of Nucleic Acid Cargo to Emiliania huxleyi, a Calcifying Marine Coccolithophore.

Flavin C, Chatterjee A. Flavin C, et al. Among authors: chatterjee a. ACS Synth Biol. 2024 Jan 19;13(1):77-84. doi: 10.1021/acssynbio.3c00670. Epub 2023 Dec 26. ACS Synth Biol. 2024. PMID: 38147049

14

A high-throughput and low-waste viability assay for microbes.

Meyer CT, Lynch GK, Stamo DF, Miller EJ, Chatterjee A, Kralj JM. Meyer CT, et al. Among authors: chatterjee a. Nat Microbiol. 2023 Dec;8(12):2304-2314. doi: 10.1038/s41564-023-01513-9. Epub 2023 Nov 2. Nat Microbiol. 2023. PMID: 37919425 Free PMC article.

15

Light-Driven Metabolic Pathways in Non-Photosynthetic Biohybrid Bacteria.

Bassett S, Ding Y, Roy MK, Reisz JA, D'Alessandro A, Nagpal P, Chatterjee A. Bassett S, et al. Among authors: chatterjee a. Chembiochem. 2024 Jan 15;25(2):e202300572. doi: 10.1002/cbic.202300572. Epub 2023 Nov 29. Chembiochem. 2024. PMID: 37861981

16

Light-driven Transformation of Carbon Monoxide into Hydrocarbons using CdS@ZnS : VFe Protein Biohybrids.

Ding Y, Lee CC, Hu Y, Ribbe MM, Nagpal P, Chatterjee A. Ding Y, et al. Among authors: chatterjee a. ChemSusChem. 2023 Oct 20;16(20):e202300981. doi: 10.1002/cssc.202300981. Epub 2023 Aug 7. ChemSusChem. 2023. PMID: 37419863

17

Photoactivated antibiotics to treat intracellular infection of bacteria.

Eller KA, Stamo DF, McCollum CR, Campos JK, Levy M, Nagpal P, Chatterjee A. Eller KA, et al. Among authors: chatterjee a. Nanoscale Adv. 2023 Mar 7;5(7):1910-1918. doi: 10.1039/d2na00378c. eCollection 2023 Mar 28. Nanoscale Adv. 2023. PMID: 36998655 Free PMC article.

18

Safety and Biodistribution of Nanoligomers Targeting the SARS-CoV-2 Genome for the Treatment of COVID-19.

McCollum CR, Courtney CM, O'Connor NJ, Aunins TR, Jordan TX, Rogers KL, Brindley S, Brown JM, Nagpal P, Chatterjee A. McCollum CR, et al. Among authors: chatterjee a. ACS Biomater Sci Eng. 2023 Mar 13;9(3):1656-1671. doi: 10.1021/acsbiomaterials.2c00669. Epub 2023 Feb 28. ACS Biomater Sci Eng. 2023. PMID: 36853144

19

High Throughput Viability Assay for Microbiology.

Meyer CT, Lynch GK, Stamo DF, Miller EJ, Chatterjee A, Kralj JM. Meyer CT, et al. Among authors: chatterjee a. bioRxiv [Preprint]. 2023 Jan 4:2023.01.04.522767. doi: 10.1101/2023.01.04.522767. bioRxiv. 2023. Update in: Nat Microbiol. 2023 Dec;8(12):2304-2314. doi: 10.1038/s41564-023-01513-9. PMID: 36712102 Free PMC article. Updated. Preprint.

20

Identifying an Optimal Neuroinflammation Treatment Using a Nanoligomer Discovery Engine.

Sharma S, Borski C, Hanson J, Garcia MA, Link CD, Hoeffer C, Chatterjee A, Nagpal P. Sharma S, et al. Among authors: chatterjee a. ACS Chem Neurosci. 2022 Dec 7;13(23):3247-3256. doi: 10.1021/acschemneuro.2c00365. Epub 2022 Nov 21. ACS Chem Neurosci. 2022. PMID: 36410860

21

Reversing radiation-induced immunosuppression using a new therapeutic modality.

Courtney CM, Sharma S, Fallgren C, Weil MM, Chatterjee A, Nagpal P. Courtney CM, et al. Among authors: chatterjee a. Life Sci Space Res (Amst). 2022 Nov;35:127-139. doi: 10.1016/j.lssr.2022.05.002. Epub 2022 May 11. Life Sci Space Res (Amst). 2022. PMID: 36336358 Free article.

22

Looking on the horizon; potential and unique approaches to developing radiation countermeasures for deep space travel.

Bokhari RS, Beheshti A, Blutt SE, Bowles DE, Brenner D, Britton R, Bronk L, Cao X, Chatterjee A, Clay DE, Courtney C, Fox DT, Gaber MW, Gerecht S, Grabham P, Grosshans D, Guan F, Jezuit EA, Kirsch DG, Liu Z, Maletic-Savatic M, Miller KM, Montague RA, Nagpal P, Osenberg S, Parkitny L, Pierce NA, Porada C, Rosenberg SM, Sargunas P, Sharma S, Spangler J, Tavakol DN, Thomas D, Vunjak-Novakovic G, Wang C, Whitcomb L, Young DW, Donoviel D. Bokhari RS, et al. Among authors: chatterjee a. Life Sci Space Res (Amst). 2022 Nov;35:105-112. doi: 10.1016/j.lssr.2022.08.003. Epub 2022 Aug 7. Life Sci Space Res (Amst). 2022. PMID: 36336356 Free article.

23

Nanoligomers Targeting Human miRNA for the Treatment of Severe COVID-19 Are Safe and Nontoxic in Mice.

McCollum CR, Courtney CM, O'Connor NJ, Aunins TR, Ding Y, Jordan TX, Rogers KL, Brindley S, Brown JM, Nagpal P, Chatterjee A. McCollum CR, et al. Among authors: chatterjee a. ACS Biomater Sci Eng. 2022 Jul 11;8(7):3087-3106. doi: 10.1021/acsbiomaterials.2c00510. Epub 2022 Jun 21. ACS Biomater Sci Eng. 2022. PMID: 35729709

24

Potentiating antibiotic efficacy via perturbation of non-essential gene expression.

Otoupal PB, Eller KA, Erickson KE, Campos J, Aunins TR, Chatterjee A. Otoupal PB, et al. Among authors: chatterjee a. Commun Biol. 2021 Nov 5;4(1):1267. doi: 10.1038/s42003-021-02783-x. Commun Biol. 2021. PMID: 34741116 Free PMC article.

25

Role of miR-2392 in driving SARS-CoV-2 infection.

McDonald JT, Enguita FJ, Taylor D, Griffin RJ, Priebe W, Emmett MR, Sajadi MM, Harris AD, Clement J, Dybas JM, Aykin-Burns N, Guarnieri JW, Singh LN, Grabham P, Baylin SB, Yousey A, Pearson AN, Corry PM, Saravia-Butler A, Aunins TR, Sharma S, Nagpal P, Meydan C, Foox J, Mozsary C, Cerqueira B, Zaksas V, Singh U, Wurtele ES, Costes SV, Davanzo GG, Galeano D, Paccanaro A, Meinig SL, Hagan RS, Bowman NM; UNC COVID-19 Pathobiology Consortium; Wolfgang MC, Altinok S, Sapoval N, Treangen TJ, Moraes-Vieira PM, Vanderburg C, Wallace DC, Schisler JC, Mason CE, Chatterjee A, Meller R, Beheshti A. McDonald JT, et al. Among authors: chatterjee a. Cell Rep. 2021 Oct 19;37(3):109839. doi: 10.1016/j.celrep.2021.109839. Epub 2021 Sep 30. Cell Rep. 2021. PMID: 34624208 Free PMC article.

26

Photoactivated Indium Phosphide Quantum Dots Treat Multidrug-Resistant Bacterial Abscesses In Vivo.

McCollum CR, Bertram JR, Nagpal P, Chatterjee A. McCollum CR, et al. Among authors: chatterjee a. ACS Appl Mater Interfaces. 2021 Jul 7;13(26):30404-30419. doi: 10.1021/acsami.1c08306. Epub 2021 Jun 22. ACS Appl Mater Interfaces. 2021. PMID: 34156817

27

The Great Deceiver: miR-2392's Hidden Role in Driving SARS-CoV-2 Infection.

McDonald JT, Enguita FJ, Taylor D, Griffin RJ, Priebe W, Emmett MR, Sajadi MM, Harris AD, Clement J, Dybas JM, Aykin-Burns N, Guarnieri JW, Singh LN, Grabham P, Baylin SB, Yousey A, Pearson AN, Corry PM, Saravia-Butler A, Aunins TR, Sharma S, Nagpal P, Meydan C, Foox J, Mozsary C, Cerqueira B, Zaksas V, Singh U, Wurtele ES, Costes SV, Davanzo GG, Galeano D, Paccanaro A, Meinig SL, Hagan RS, Bowman NM; UNC COVID-19 Pathobiology Consortium; Wolfgang MC, Altinok S, Sapoval N, Treangen TJ, Moraes-Vieira PM, Vanderburg C, Wallace DC, Schisler J, Mason CE, Chatterjee A, Meller R, Beheshti A. McDonald JT, et al. Among authors: chatterjee a. bioRxiv [Preprint]. 2021 Aug 18:2021.04.23.441024. doi: 10.1101/2021.04.23.441024. bioRxiv. 2021. Update in: Cell Rep. 2021 Oct 19;37(3):109839. doi: 10.1016/j.celrep.2021.109839. PMID: 33948587 Free PMC article. Updated. Preprint.

28

Light-activated quantum dot potentiation of antibiotics to treat drug-resistant bacterial biofilms.

Stamo DF, Nagpal P, Chatterjee A. Stamo DF, et al. Among authors: chatterjee a. Nanoscale Adv. 2021 Apr 21;3(10):2782-2786. doi: 10.1039/d1na00056j. eCollection 2021 May 18. Nanoscale Adv. 2021. PMID: 36134178 Free PMC article.

29

Facile accelerated specific therapeutic (FAST) platform develops antisense therapies to counter multidrug-resistant bacteria.

Eller KA, Aunins TR, Courtney CM, Campos JK, Otoupal PB, Erickson KE, Madinger NE, Chatterjee A. Eller KA, et al. Among authors: chatterjee a. Commun Biol. 2021 Mar 12;4(1):331. doi: 10.1038/s42003-021-01856-1. Commun Biol. 2021. PMID: 33712689 Free PMC article.

30

Engineering Transcriptional Interference through RNA Polymerase Processivity Control.

O'Connor NJ, Bordoy AE, Chatterjee A. O'Connor NJ, et al. Among authors: chatterjee a. ACS Synth Biol. 2021 Apr 16;10(4):737-748. doi: 10.1021/acssynbio.0c00534. Epub 2021 Mar 12. ACS Synth Biol. 2021. PMID: 33710852

31

Photoexcited Quantum Dots as Efficacious and Nontoxic Antibiotics in an Animal Model.

McCollum CR, Levy M, Bertram JR, Nagpal P, Chatterjee A. McCollum CR, et al. Among authors: chatterjee a. ACS Biomater Sci Eng. 2021 May 10;7(5):1863-1875. doi: 10.1021/acsbiomaterials.0c01406. Epub 2021 Jan 12. ACS Biomater Sci Eng. 2021. PMID: 33443397

32

Transcriptome-based design of antisense inhibitors potentiates carbapenem efficacy in CRE Escherichia coli.

Aunins TR, Erickson KE, Chatterjee A. Aunins TR, et al. Among authors: chatterjee a. Proc Natl Acad Sci U S A. 2020 Dec 1;117(48):30699-30709. doi: 10.1073/pnas.1922187117. Epub 2020 Nov 16. Proc Natl Acad Sci U S A. 2020. PMID: 33199638 Free PMC article.

33

Construction of Two-Input Logic Gates Using Transcriptional Interference.

Bordoy AE, O'Connor NJ, Chatterjee A. Bordoy AE, et al. Among authors: chatterjee a. ACS Synth Biol. 2019 Oct 18;8(10):2428-2441. doi: 10.1021/acssynbio.9b00321. Epub 2019 Oct 1. ACS Synth Biol. 2019. PMID: 31532632

34

Isolating the Escherichia coli Transcriptomic Response to Superoxide Generation from Cadmium Chalcogenide Quantum Dots.

Aunins TR, Eller KA, Courtney CM, Levy M, Goodman SM, Nagpal P, Chatterjee A. Aunins TR, et al. Among authors: chatterjee a. ACS Biomater Sci Eng. 2019 Sep 9;5(9):4206-4218. doi: 10.1021/acsbiomaterials.9b01087. Epub 2019 Aug 7. ACS Biomater Sci Eng. 2019. PMID: 33417778

35

Near-Infrared-Light-Triggered Antimicrobial Indium Phosphide Quantum Dots.

Levy M, Bertram JR, Eller KA, Chatterjee A, Nagpal P. Levy M, et al. Among authors: chatterjee a. Angew Chem Int Ed Engl. 2019 Aug 12;58(33):11414-11418. doi: 10.1002/anie.201906501. Epub 2019 Jul 4. Angew Chem Int Ed Engl. 2019. PMID: 31184802

36

Tuning Ternary Zn_1-xCd_xTe Quantum Dot Composition: Engineering Electronic States for Light-Activated Superoxide Generation as a Therapeutic against Multidrug-Resistant Bacteria.

Levy M, Chowdhury PP, Eller KA, Chatterjee A, Nagpal P. Levy M, et al. Among authors: chatterjee a. ACS Biomater Sci Eng. 2019 Jun 10;5(6):3111-3118. doi: 10.1021/acsbiomaterials.9b00524. Epub 2019 May 24. ACS Biomater Sci Eng. 2019. PMID: 33405543

37

Nucleotide and structural label identification in single RNA molecules with quantum tunneling spectroscopy.

Abel GR Jr, Korshoj LE, Otoupal PB, Khan S, Chatterjee A, Nagpal P. Abel GR Jr, et al. Among authors: chatterjee a. Chem Sci. 2018 Nov 5;10(4):1052-1063. doi: 10.1039/c8sc03354d. eCollection 2019 Jan 28. Chem Sci. 2018. PMID: 30774901 Free PMC article.

38

Design of a De Novo Aggregating Antimicrobial Peptide and a Bacterial Conjugation-Based Delivery System.

Collins LT, Otoupal PB, Campos JK, Courtney CM, Chatterjee A. Collins LT, et al. Among authors: chatterjee a. Biochemistry. 2019 Mar 19;58(11):1521-1526. doi: 10.1021/acs.biochem.8b00888. Epub 2018 Nov 9. Biochemistry. 2019. PMID: 30403128

39

Multiplexed deactivated CRISPR-Cas9 gene expression perturbations deter bacterial adaptation by inducing negative epistasis.

Otoupal PB, Cordell WT, Bachu V, Sitton MJ, Chatterjee A. Otoupal PB, et al. Among authors: chatterjee a. Commun Biol. 2018 Sep 3;1:129. doi: 10.1038/s42003-018-0135-2. eCollection 2018. Commun Biol. 2018. PMID: 30272008 Free PMC article.

40

CRISPR Gene Perturbations Provide Insights for Improving Bacterial Biofuel Tolerance.

Otoupal PB, Chatterjee A. Otoupal PB, et al. Among authors: chatterjee a. Front Bioeng Biotechnol. 2018 Sep 4;6:122. doi: 10.3389/fbioe.2018.00122. eCollection 2018. Front Bioeng Biotechnol. 2018. PMID: 30234107 Free PMC article.

41

Assessing Different Reactive Oxygen Species as Potential Antibiotics: Selectivity of Intracellular Superoxide Generation Using Quantum Dots.

Levy M, Courtney CM, Chowdhury PP, Ding Y, Grey EL, Goodman SM, Chatterjee A, Nagpal P. Levy M, et al. Among authors: chatterjee a. ACS Appl Bio Mater. 2018 Aug 20;1(2):529-537. doi: 10.1021/acsabm.8b00292. Epub 2018 Aug 9. ACS Appl Bio Mater. 2018. PMID: 35016375

42

Spaceflight Modifies Escherichia coli Gene Expression in Response to Antibiotic Exposure and Reveals Role of Oxidative Stress Response.

Aunins TR, Erickson KE, Prasad N, Levy SE, Jones A, Shrestha S, Mastracchio R, Stodieck L, Klaus D, Zea L, Chatterjee A. Aunins TR, et al. Among authors: chatterjee a. Front Microbiol. 2018 Mar 16;9:310. doi: 10.3389/fmicb.2018.00310. eCollection 2018. Front Microbiol. 2018. PMID: 29615983 Free PMC article.

43

Designing Superoxide-Generating Quantum Dots for Selective Light-Activated Nanotherapy.

Goodman SM, Levy M, Li FF, Ding Y, Courtney CM, Chowdhury PP, Erbse A, Chatterjee A, Nagpal P. Goodman SM, et al. Among authors: chatterjee a. Front Chem. 2018 Mar 14;6:46. doi: 10.3389/fchem.2018.00046. eCollection 2018. Front Chem. 2018. PMID: 29594097 Free PMC article.

44

Intracellular Hepatitis C Virus Modeling Predicts Infection Dynamics and Viral Protein Mechanisms.

Aunins TR, Marsh KA, Subramanya G, Uprichard SL, Perelson AS, Chatterjee A. Aunins TR, et al. Among authors: chatterjee a. J Virol. 2018 May 14;92(11):e02098-17. doi: 10.1128/JVI.02098-17. Print 2018 Jun 1. J Virol. 2018. PMID: 29563295 Free PMC article.

45

High-Throughput Block Optical DNA Sequence Identification.

Sagar DM, Korshoj LE, Hanson KB, Chowdhury PP, Otoupal PB, Chatterjee A, Nagpal P. Sagar DM, et al. Among authors: chatterjee a. Small. 2018 Jan;14(4). doi: 10.1002/smll.201703165. Epub 2017 Dec 4. Small. 2018. PMID: 29205813

46

The Tolerome: A Database of Transcriptome-Level Contributions to Diverse Escherichia coli Resistance and Tolerance Phenotypes.

Erickson KE, Winkler JD, Nguyen DT, Gill RT, Chatterjee A. Erickson KE, et al. Among authors: chatterjee a. ACS Synth Biol. 2017 Dec 15;6(12):2302-2315. doi: 10.1021/acssynbio.7b00235. Epub 2017 Oct 19. ACS Synth Biol. 2017. PMID: 29017328

47

Conformational Smear Characterization and Binning of Single-Molecule Conductance Measurements for Enhanced Molecular Recognition.

Korshoj LE, Afsari S, Chatterjee A, Nagpal P. Korshoj LE, et al. Among authors: chatterjee a. J Am Chem Soc. 2017 Nov 1;139(43):15420-15428. doi: 10.1021/jacs.7b08246. Epub 2017 Oct 20. J Am Chem Soc. 2017. PMID: 29017006

48

Potentiating antibiotics in drug-resistant clinical isolates via stimuli-activated superoxide generation.

Courtney CM, Goodman SM, Nagy TA, Levy M, Bhusal P, Madinger NE, Detweiler CS, Nagpal P, Chatterjee A. Courtney CM, et al. Among authors: chatterjee a. Sci Adv. 2017 Oct 4;3(10):e1701776. doi: 10.1126/sciadv.1701776. eCollection 2017 Oct. Sci Adv. 2017. PMID: 28983513 Free PMC article.

49

Quantum Point Contact Single-Nucleotide Conductance for DNA and RNA Sequence Identification.

Afsari S, Korshoj LE, Abel GR Jr, Khan S, Chatterjee A, Nagpal P. Afsari S, et al. Among authors: chatterjee a. ACS Nano. 2017 Nov 28;11(11):11169-11181. doi: 10.1021/acsnano.7b05500. Epub 2017 Oct 6. ACS Nano. 2017. PMID: 28968085

50

ROS mediated selection for increased NADPH availability in Escherichia coli.

Reynolds TS, Courtney CM, Erickson KE, Wolfe LM, Chatterjee A, Nagpal P, Gill RT. Reynolds TS, et al. Among authors: chatterjee a. Biotechnol Bioeng. 2017 Nov;114(11):2685-2689. doi: 10.1002/bit.26385. Epub 2017 Aug 17. Biotechnol Bioeng. 2017. PMID: 28710857

51

Transcriptome-Level Signatures in Gene Expression and Gene Expression Variability during Bacterial Adaptive Evolution.

Erickson KE, Otoupal PB, Chatterjee A. Erickson KE, et al. Among authors: chatterjee a. mSphere. 2017 Feb 15;2(1):e00009-17. doi: 10.1128/mSphere.00009-17. eCollection 2017 Jan-Feb. mSphere. 2017. PMID: 28217741 Free PMC article.

52

Draft Genome Sequences of Clinical Isolates of Multidrug-Resistant Acinetobacter baumannii.

Erickson KE, Madinger NE, Chatterjee A. Erickson KE, et al. Among authors: chatterjee a. Genome Announc. 2017 Feb 2;5(5):e01547-16. doi: 10.1128/genomeA.01547-16. Genome Announc. 2017. PMID: 28153899 Free PMC article.

53

Single Nucleobase Identification Using Biophysical Signatures from Nanoelectronic Quantum Tunneling.

Korshoj LE, Afsari S, Khan S, Chatterjee A, Nagpal P. Korshoj LE, et al. Among authors: chatterjee a. Small. 2017 Mar;13(11). doi: 10.1002/smll.201603033. Epub 2017 Jan 9. Small. 2017. PMID: 28067976

54

Gene Expression Variability Underlies Adaptive Resistance in Phenotypically Heterogeneous Bacterial Populations.

Erickson KE, Otoupal PB, Chatterjee A. Erickson KE, et al. Among authors: chatterjee a. ACS Infect Dis. 2015 Nov 13;1(11):555-67. doi: 10.1021/acsinfecdis.5b00095. Epub 2015 Sep 22. ACS Infect Dis. 2015. PMID: 27623410

55

CRISPR Perturbation of Gene Expression Alters Bacterial Fitness under Stress and Reveals Underlying Epistatic Constraints.

Otoupal PB, Erickson KE, Escalas-Bordoy A, Chatterjee A. Otoupal PB, et al. Among authors: chatterjee a. ACS Synth Biol. 2017 Jan 20;6(1):94-107. doi: 10.1021/acssynbio.6b00050. Epub 2016 Sep 1. ACS Synth Biol. 2017. PMID: 27529436

56

Transcriptional Interference in Convergent Promoters as a Means for Tunable Gene Expression.

Bordoy AE, Varanasi US, Courtney CM, Chatterjee A. Bordoy AE, et al. Among authors: chatterjee a. ACS Synth Biol. 2016 Dec 16;5(12):1331-1341. doi: 10.1021/acssynbio.5b00223. Epub 2016 Jul 5. ACS Synth Biol. 2016. PMID: 27346626

57

Draft Genome Sequence for a Clinical Isolate of Vancomycin-Resistant Enterococcus faecalis.

Erickson KE, Madinger NE, Chatterjee A. Erickson KE, et al. Among authors: chatterjee a. Genome Announc. 2016 Jun 23;4(3):e00584-16. doi: 10.1128/genomeA.00584-16. Genome Announc. 2016. PMID: 27340066 Free PMC article.

58

Photoexcited quantum dots for killing multidrug-resistant bacteria.

Courtney CM, Goodman SM, McDaniel JA, Madinger NE, Chatterjee A, Nagpal P. Courtney CM, et al. Among authors: chatterjee a. Nat Mater. 2016 May;15(5):529-34. doi: 10.1038/nmat4542. Epub 2016 Jan 18. Nat Mater. 2016. PMID: 26779882

59

Modelling the interaction between danoprevir and mericitabine in the treatment of chronic HCV infection.

Canini L, Guedj J, Chatterjee A, Lemenuel-Diot A, Smith PF, Perelson AS. Canini L, et al. Among authors: chatterjee a. Antivir Ther. 2016;21(4):297-306. doi: 10.3851/IMP3006. Epub 2015 Nov 10. Antivir Ther. 2016. PMID: 26555159 Free PMC article. Clinical Trial.

60

Multiple Energy Exciton Shelves in Quantum-Dot-DNA Nanobioelectronics.

Goodman SM, Singh V, Ribot JC, Chatterjee A, Nagpal P. Goodman SM, et al. Among authors: chatterjee a. J Phys Chem Lett. 2014 Nov 6;5(21):3909-13. doi: 10.1021/jz502058y. Epub 2014 Oct 27. J Phys Chem Lett. 2014. PMID: 26278768

61

Cis-Antisense Transcription Gives Rise to Tunable Genetic Switch Behavior: A Mathematical Modeling Approach.

Bordoy AE, Chatterjee A. Bordoy AE, et al. Among authors: chatterjee a. PLoS One. 2015 Jul 29;10(7):e0133873. doi: 10.1371/journal.pone.0133873. eCollection 2015. PLoS One. 2015. PMID: 26222133 Free PMC article.

62

Sequence-Specific Peptide Nucleic Acid-Based Antisense Inhibitors of TEM-1 β-Lactamase and Mechanism of Adaptive Resistance.

Courtney CM, Chatterjee A. Courtney CM, et al. Among authors: chatterjee a. ACS Infect Dis. 2015 Jun 12;1(6):253-63. doi: 10.1021/acsinfecdis.5b00042. Epub 2015 May 26. ACS Infect Dis. 2015. PMID: 27622741

63

Measurements of single nucleotide electronic states as nanoelectronic fingerprints for identification of DNA nucleobases, their protonated and unprotonated states, isomers, and tautomers.

Ribot JC, Chatterjee A, Nagpal P. Ribot JC, et al. Among authors: chatterjee a. J Phys Chem B. 2015 Apr 16;119(15):4968-74. doi: 10.1021/acs.jpcb.5b01403. Epub 2015 Apr 1. J Phys Chem B. 2015. PMID: 25793310

64

CONSTRICTOR: constraint modification provides insight into design of biochemical networks.

Erickson KE, Gill RT, Chatterjee A. Erickson KE, et al. Among authors: chatterjee a. PLoS One. 2014 Nov 25;9(11):e113820. doi: 10.1371/journal.pone.0113820. eCollection 2014. PLoS One. 2014. PMID: 25422896 Free PMC article.

65

A pharmacokinetic/viral kinetic model to evaluate the treatment effectiveness of danoprevir against chronic HCV.

Canini L, Chatterjee A, Guedj J, Lemenuel-Diot A, Brennan B, Smith PF, Perelson AS. Canini L, et al. Among authors: chatterjee a. Antivir Ther. 2015;20(5):469-77. doi: 10.3851/IMP2879. Epub 2014 Oct 16. Antivir Ther. 2015. PMID: 25321394 Free PMC article. Clinical Trial.

66

Role of intracellular stochasticity in biofilm growth. Insights from population balance modeling.

Shu CC, Chatterjee A, Hu WS, Ramkrishna D. Shu CC, et al. Among authors: chatterjee a. PLoS One. 2013 Nov 13;8(11):e79196. doi: 10.1371/journal.pone.0079196. eCollection 2013. PLoS One. 2013. PMID: 24232571 Free PMC article.

67

Antagonistic self-sensing and mate-sensing signaling controls antibiotic-resistance transfer.

Chatterjee A, Cook LC, Shu CC, Chen Y, Manias DA, Ramkrishna D, Dunny GM, Hu WS. Chatterjee A, et al. Proc Natl Acad Sci U S A. 2013 Apr 23;110(17):7086-90. doi: 10.1073/pnas.1212256110. Epub 2013 Apr 8. Proc Natl Acad Sci U S A. 2013. PMID: 23569272 Free PMC article.

68

Mathematical modelling of HCV infection: what can it teach us in the era of direct-acting antiviral agents?

Chatterjee A, Guedj J, Perelson AS. Chatterjee A, et al. Antivir Ther. 2012;17(6 Pt B):1171-82. doi: 10.3851/IMP2428. Epub 2012 Oct 5. Antivir Ther. 2012. PMID: 23186606 Free PMC article. Review.

69

Hepatitis C viral kinetics: the past, present, and future.

Chatterjee A, Smith PF, Perelson AS. Chatterjee A, et al. Clin Liver Dis. 2013 Feb;17(1):13-26. doi: 10.1016/j.cld.2012.09.003. Clin Liver Dis. 2013. PMID: 23177280 Free PMC article. Review.

70

MODELING OF GENE REGULATORY PROCESSES BY POPULATION MEDIATED SIGNALING. NEW APPLICATIONS OF POPULATION BALANCES.

Shu CC, Chatterjee A, Hu WS, Ramkrishna D. Shu CC, et al. Among authors: chatterjee a. Chem Eng Sci. 2012 Mar 5;70:188-199. doi: 10.1016/j.ces.2011.07.062. Epub 2011 Aug 11. Chem Eng Sci. 2012. PMID: 22581980 Free PMC article.

71

RNA-mediated reciprocal regulation between two bacterial operons is RNase III dependent.

Johnson CM, Haemig HH, Chatterjee A, Wei-Shou H, Weaver KE, Dunny GM. Johnson CM, et al. Among authors: chatterjee a. mBio. 2011 Sep 27;2(5):e00189-11. doi: 10.1128/mBio.00189-11. Print 2011. mBio. 2011. PMID: 21954305 Free PMC article.

72

Bistability versus bimodal distributions in gene regulatory processes from population balance.

Shu CC, Chatterjee A, Dunny G, Hu WS, Ramkrishna D. Shu CC, et al. Among authors: chatterjee a. PLoS Comput Biol. 2011 Aug;7(8):e1002140. doi: 10.1371/journal.pcbi.1002140. Epub 2011 Aug 25. PLoS Comput Biol. 2011. PMID: 21901083 Free PMC article.

73

Biofilm growth alters regulation of conjugation by a bacterial pheromone.

Cook L, Chatterjee A, Barnes A, Yarwood J, Hu WS, Dunny G. Cook L, et al. Among authors: chatterjee a. Mol Microbiol. 2011 Sep;81(6):1499-510. doi: 10.1111/j.1365-2958.2011.07786.x. Epub 2011 Aug 15. Mol Microbiol. 2011. PMID: 21843206 Free PMC article.

74

Convergent transcription in the butyrolactone regulon in Streptomyces coelicolor confers a bistable genetic switch for antibiotic biosynthesis.

Chatterjee A, Drews L, Mehra S, Takano E, Kaznessis YN, Hu WS. Chatterjee A, et al. PLoS One. 2011;6(7):e21974. doi: 10.1371/journal.pone.0021974. Epub 2011 Jul 12. PLoS One. 2011. PMID: 21765930 Free PMC article.

75

Convergent transcription confers a bistable switch in Enterococcus faecalis conjugation.

Chatterjee A, Johnson CM, Shu CC, Kaznessis YN, Ramkrishna D, Dunny GM, Hu WS. Chatterjee A, et al. Proc Natl Acad Sci U S A. 2011 Jun 7;108(23):9721-6. doi: 10.1073/pnas.1101569108. Epub 2011 May 23. Proc Natl Acad Sci U S A. 2011. PMID: 21606359 Free PMC article.

76

Tweaking biological switches through a better understanding of bistability behavior.

Chatterjee A, Kaznessis YN, Hu WS. Chatterjee A, et al. Curr Opin Biotechnol. 2008 Oct;19(5):475-81. doi: 10.1016/j.copbio.2008.08.010. Epub 2008 Oct 1. Curr Opin Biotechnol. 2008. PMID: 18804166 Free PMC article. Review.

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