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An organelle-specific protein landscape identifies novel diseases and molecular mechanisms.
Boldt K, van Reeuwijk J, Lu Q, Koutroumpas K, Nguyen TM, Texier Y, van Beersum SE, Horn N, Willer JR, Mans DA, Dougherty G, Lamers IJ, Coene KL, Arts HH, Betts MJ, Beyer T, Bolat E, Gloeckner CJ, Haidari K, Hetterschijt L, Iaconis D, Jenkins D, Klose F, Knapp B, Latour B, Letteboer SJ, Marcelis CL, Mitic D, Morleo M, Oud MM, Riemersma M, Rix S, Terhal PA, Toedt G, van Dam TJ, de Vrieze E, Wissinger Y, Wu KM, Apic G, Beales PL, Blacque OE, Gibson TJ, Huynen MA, Katsanis N, Kremer H, Omran H, van Wijk E, Wolfrum U, Kepes F, Davis EE, Franco B, Giles RH, Ueffing M, Russell RB, Roepman R; UK10K Rare Diseases Group. Boldt K, et al. Among authors: apic g. Nat Commun. 2016 May 13;7:11491. doi: 10.1038/ncomms11491. Nat Commun. 2016. PMID: 27173435 Free PMC article.
Mechismo: predicting the mechanistic impact of mutations and modifications on molecular interactions.
Betts MJ, Lu Q, Jiang Y, Drusko A, Wichmann O, Utz M, Valtierra-GutiƩrrez IA, Schlesner M, Jaeger N, Jones DT, Pfister S, Lichter P, Eils R, Siebert R, Bork P, Apic G, Gavin AC, Russell RB. Betts MJ, et al. Among authors: apic g. Nucleic Acids Res. 2015 Jan;43(2):e10. doi: 10.1093/nar/gku1094. Epub 2014 Nov 11. Nucleic Acids Res. 2015. PMID: 25392414 Free PMC article.
An insight into domain combinations.
Apic G, Gough J, Teichmann SA. Apic G, et al. Bioinformatics. 2001;17 Suppl 1:S83-9. doi: 10.1093/bioinformatics/17.suppl_1.s83. Bioinformatics. 2001. PMID: 11472996
ProtChemSI: a network of protein-chemical structural interactions.
Kalinina OV, Wichmann O, Apic G, Russell RB. Kalinina OV, et al. Among authors: apic g. Nucleic Acids Res. 2012 Jan;40(Database issue):D549-53. doi: 10.1093/nar/gkr1049. Epub 2011 Nov 21. Nucleic Acids Res. 2012. PMID: 22110041 Free PMC article.
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