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Dissecting eukaryotic translation and its control by ribosome density mapping.
Arava Y, Boas FE, Brown PO, Herschlag D. Arava Y, et al. Nucleic Acids Res. 2005 Apr 28;33(8):2421-32. doi: 10.1093/nar/gki331. Print 2005. Nucleic Acids Res. 2005. PMID: 15860778 Free PMC article.
Genome-wide analysis of mRNA translation profiles in Saccharomyces cerevisiae.
Arava Y, Wang Y, Storey JD, Liu CL, Brown PO, Herschlag D. Arava Y, et al. Proc Natl Acad Sci U S A. 2003 Apr 1;100(7):3889-94. doi: 10.1073/pnas.0635171100. Epub 2003 Mar 26. Proc Natl Acad Sci U S A. 2003. PMID: 12660367 Free PMC article.
Detecting ribosomal association with the 5' leader of mRNAs by Ribosome Density Mapping (RDM).
Eldad N, Arava Y. Eldad N, et al. Among authors: arava y. Methods Enzymol. 2007;431:163-75. doi: 10.1016/S0076-6879(07)31009-4. Methods Enzymol. 2007. PMID: 17923235 Review.
A ribosomal density-mapping procedure to explore ribosome positions along translating mRNAs.
Eldad N, Arava Y. Eldad N, et al. Among authors: arava y. Methods Mol Biol. 2008;419:231-42. doi: 10.1007/978-1-59745-033-1_16. Methods Mol Biol. 2008. PMID: 18369987
Identification and characterization of extensive intra-molecular associations between 3'-UTRs and their ORFs.
Eldad N, Yosefzon Y, Arava Y. Eldad N, et al. Among authors: arava y. Nucleic Acids Res. 2008 Dec;36(21):6728-38. doi: 10.1093/nar/gkn754. Epub 2008 Oct 23. Nucleic Acids Res. 2008. PMID: 18948291 Free PMC article.
Exploring translation regulation by global analysis of ribosomal association.
Melamed D, Eliyahu E, Arava Y. Melamed D, et al. Among authors: arava y. Methods. 2009 Jul;48(3):301-5. doi: 10.1016/j.ymeth.2009.04.020. Epub 2009 May 6. Methods. 2009. PMID: 19426805
Distinct RNA-binding modules in a single PUF protein cooperate to determine RNA specificity.
Qiu C, Dutcher RC, Porter DF, Arava Y, Wickens M, Hall TMT. Qiu C, et al. Among authors: arava y. Nucleic Acids Res. 2019 Sep 19;47(16):8770-8784. doi: 10.1093/nar/gkz583. Nucleic Acids Res. 2019. PMID: 31294800 Free PMC article.
Genome-wide polysomal analysis of a yeast strain with mutated ribosomal protein S9.
Pnueli L, Arava Y. Pnueli L, et al. Among authors: arava y. BMC Genomics. 2007 Aug 21;8:285. doi: 10.1186/1471-2164-8-285. BMC Genomics. 2007. PMID: 17711575 Free PMC article.
Tom20 mediates localization of mRNAs to mitochondria in a translation-dependent manner.
Eliyahu E, Pnueli L, Melamed D, Scherrer T, Gerber AP, Pines O, Rapaport D, Arava Y. Eliyahu E, et al. Among authors: arava y. Mol Cell Biol. 2010 Jan;30(1):284-94. doi: 10.1128/MCB.00651-09. Mol Cell Biol. 2010. PMID: 19858288 Free PMC article.
The extent of ribosome queuing in budding yeast.
Diament A, Feldman A, Schochet E, Kupiec M, Arava Y, Tuller T. Diament A, et al. Among authors: arava y. PLoS Comput Biol. 2018 Jan 29;14(1):e1005951. doi: 10.1371/journal.pcbi.1005951. eCollection 2018 Jan. PLoS Comput Biol. 2018. PMID: 29377894 Free PMC article.
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