Arenas M - Search Results

1

Maximum-Likelihood Phylogenetic Inference with Selection on Protein Folding Stability.

Arenas M, Sánchez-Cobos A, Bastolla U. Arenas M, et al. Mol Biol Evol. 2015 Aug;32(8):2195-207. doi: 10.1093/molbev/msv085. Epub 2015 Apr 2. Mol Biol Evol. 2015. PMID: 25837579 Free PMC article.

2

Characterization of reticulate networks based on the coalescent with recombination.

Arenas M, Valiente G, Posada D. Arenas M, et al. Mol Biol Evol. 2008 Dec;25(12):2517-20. doi: 10.1093/molbev/msn219. Epub 2008 Oct 15. Mol Biol Evol. 2008. PMID: 18927089 Free PMC article.

3

Coalescent simulation of intracodon recombination.

Arenas M, Posada D. Arenas M, et al. Genetics. 2010 Feb;184(2):429-37. doi: 10.1534/genetics.109.109736. Epub 2009 Nov 23. Genetics. 2010. PMID: 19933876 Free PMC article.

4

The effect of recombination on the reconstruction of ancestral sequences.

Arenas M, Posada D. Arenas M, et al. Genetics. 2010 Apr;184(4):1133-9. doi: 10.1534/genetics.109.113423. Epub 2010 Feb 1. Genetics. 2010. PMID: 20124027 Free PMC article.

5

Characterization of phylogenetic networks with NetTest.

Arenas M, Patricio M, Posada D, Valiente G. Arenas M, et al. BMC Bioinformatics. 2010 May 20;11:268. doi: 10.1186/1471-2105-11-268. BMC Bioinformatics. 2010. PMID: 20487540 Free PMC article.

6

Consequences of range contractions and range shifts on molecular diversity.

Arenas M, Ray N, Currat M, Excoffier L. Arenas M, et al. Mol Biol Evol. 2012 Jan;29(1):207-18. doi: 10.1093/molbev/msr187. Epub 2011 Jul 21. Mol Biol Evol. 2012. PMID: 21778191

7

Influence of admixture and paleolithic range contractions on current European diversity gradients.

Arenas M, François O, Currat M, Ray N, Excoffier L. Arenas M, et al. Mol Biol Evol. 2013 Jan;30(1):57-61. doi: 10.1093/molbev/mss203. Epub 2012 Aug 25. Mol Biol Evol. 2013. PMID: 22923464

8

Protein evolution along phylogenetic histories under structurally constrained substitution models.

Arenas M, Dos Santos HG, Posada D, Bastolla U. Arenas M, et al. Bioinformatics. 2013 Dec 1;29(23):3020-8. doi: 10.1093/bioinformatics/btt530. Epub 2013 Sep 12. Bioinformatics. 2013. PMID: 24037213 Free PMC article.

9

Coestimation of recombination, substitution and molecular adaptation rates by approximate Bayesian computation.

Lopes JS, Arenas M, Posada D, Beaumont MA. Lopes JS, et al. Among authors: arenas m. Heredity (Edinb). 2014 Mar;112(3):255-64. doi: 10.1038/hdy.2013.101. Epub 2013 Oct 23. Heredity (Edinb). 2014. PMID: 24149652 Free PMC article.

10

Simulation of genome-wide evolution under heterogeneous substitution models and complex multispecies coalescent histories.

Arenas M, Posada D. Arenas M, et al. Mol Biol Evol. 2014 May;31(5):1295-301. doi: 10.1093/molbev/msu078. Epub 2014 Feb 19. Mol Biol Evol. 2014. PMID: 24557445 Free PMC article.

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