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Identifying single copy orthologs in Metazoa.
Creevey CJ, Muller J, Doerks T, Thompson JD, Arendt D, Bork P. Creevey CJ, et al. Among authors: arendt d. PLoS Comput Biol. 2011 Dec;7(12):e1002269. doi: 10.1371/journal.pcbi.1002269. Epub 2011 Dec 1. PLoS Comput Biol. 2011. PMID: 22144877 Free PMC article.
Vertebrate-type intron-rich genes in the marine annelid Platynereis dumerilii.
Raible F, Tessmar-Raible K, Osoegawa K, Wincker P, Jubin C, Balavoine G, Ferrier D, Benes V, de Jong P, Weissenbach J, Bork P, Arendt D. Raible F, et al. Among authors: arendt d. Science. 2005 Nov 25;310(5752):1325-6. doi: 10.1126/science.1119089. Science. 2005. PMID: 16311335
Ancient animal microRNAs and the evolution of tissue identity.
Christodoulou F, Raible F, Tomer R, Simakov O, Trachana K, Klaus S, Snyman H, Hannon GJ, Bork P, Arendt D. Christodoulou F, et al. Among authors: arendt d. Nature. 2010 Feb 25;463(7284):1084-8. doi: 10.1038/nature08744. Epub 2010 Jan 31. Nature. 2010. PMID: 20118916 Free PMC article.
4DXpress: a database for cross-species expression pattern comparisons.
Haudry Y, Berube H, Letunic I, Weeber PD, Gagneur J, Girardot C, Kapushesky M, Arendt D, Bork P, Brazma A, Furlong EE, Wittbrodt J, Henrich T. Haudry Y, et al. Among authors: arendt d. Nucleic Acids Res. 2008 Jan;36(Database issue):D847-53. doi: 10.1093/nar/gkm797. Epub 2007 Oct 4. Nucleic Acids Res. 2008. PMID: 17916571 Free PMC article.
A holistic approach to marine eco-systems biology.
Karsenti E, Acinas SG, Bork P, Bowler C, De Vargas C, Raes J, Sullivan M, Arendt D, Benzoni F, Claverie JM, Follows M, Gorsky G, Hingamp P, Iudicone D, Jaillon O, Kandels-Lewis S, Krzic U, Not F, Ogata H, Pesant S, Reynaud EG, Sardet C, Sieracki ME, Speich S, Velayoudon D, Weissenbach J, Wincker P; Tara Oceans Consortium. Karsenti E, et al. Among authors: arendt d. PLoS Biol. 2011 Oct;9(10):e1001177. doi: 10.1371/journal.pbio.1001177. Epub 2011 Oct 18. PLoS Biol. 2011. PMID: 22028628 Free PMC article.
Profiling cellular diversity in sponges informs animal cell type and nervous system evolution.
Musser JM, Schippers KJ, Nickel M, Mizzon G, Kohn AB, Pape C, Ronchi P, Papadopoulos N, Tarashansky AJ, Hammel JU, Wolf F, Liang C, Hernández-Plaza A, Cantalapiedra CP, Achim K, Schieber NL, Pan L, Ruperti F, Francis WR, Vargas S, Kling S, Renkert M, Polikarpov M, Bourenkov G, Feuda R, Gaspar I, Burkhardt P, Wang B, Bork P, Beck M, Schneider TR, Kreshuk A, Wörheide G, Huerta-Cepas J, Schwab Y, Moroz LL, Arendt D. Musser JM, et al. Among authors: arendt d. Science. 2021 Nov 5;374(6568):717-723. doi: 10.1126/science.abj2949. Epub 2021 Nov 4. Science. 2021. PMID: 34735222 Free PMC article.
Priorities for ocean microbiome research.
Tara Ocean Foundation; Tara Oceans; European Molecular Biology Laboratory (EMBL); European Marine Biological Resource Centre - European Research Infrastructure Consortium (EMBRC-ERIC). Tara Ocean Foundation, et al. Nat Microbiol. 2022 Jul;7(7):937-947. doi: 10.1038/s41564-022-01145-5. Epub 2022 Jun 30. Nat Microbiol. 2022. PMID: 35773399 Review.
174 results