Arjunan SN - Search Results

1

Space in systems biology of signaling pathways--towards intracellular molecular crowding in silico.

Takahashi K, Arjunan SN, Tomita M. Takahashi K, et al. Among authors: arjunan sn. FEBS Lett. 2005 Mar 21;579(8):1783-8. doi: 10.1016/j.febslet.2005.01.072. FEBS Lett. 2005. PMID: 15763552 Review.

2

Particle Simulation of Oxidation Induced Band 3 Clustering in Human Erythrocytes.

Shimo H, Arjunan SN, Machiyama H, Nishino T, Suematsu M, Fujita H, Tomita M, Takahashi K. Shimo H, et al. Among authors: arjunan sn. PLoS Comput Biol. 2015 Jun 5;11(6):e1004210. doi: 10.1371/journal.pcbi.1004210. eCollection 2015 Jun. PLoS Comput Biol. 2015. PMID: 26046580 Free PMC article.

3

Signaling activations through G-protein-coupled-receptor aggregations.

Watabe M, Yoshimura H, Arjunan SNV, Kaizu K, Takahashi K. Watabe M, et al. Among authors: arjunan snv. Phys Rev E. 2020 Sep;102(3-1):032413. doi: 10.1103/PhysRevE.102.032413. Phys Rev E. 2020. PMID: 33076007

4

pSpatiocyte: a high-performance simulator for intracellular reaction-diffusion systems.

Arjunan SNV, Miyauchi A, Iwamoto K, Takahashi K. Arjunan SNV, et al. BMC Bioinformatics. 2020 Jan 29;21(1):33. doi: 10.1186/s12859-019-3338-8. BMC Bioinformatics. 2020. PMID: 31996129 Free PMC article.

5

Cooperativity transitions driven by higher-order oligomer formations in ligand-induced receptor dimerization.

Watabe M, Arjunan SNV, Chew WX, Kaizu K, Takahashi K. Watabe M, et al. Among authors: arjunan snv. Phys Rev E. 2019 Dec;100(6-1):062407. doi: 10.1103/PhysRevE.100.062407. Phys Rev E. 2019. PMID: 31962468

6

Simulation of live-cell imaging system reveals hidden uncertainties in cooperative binding measurements.

Watabe M, Arjunan SNV, Chew WX, Kaizu K, Takahashi K. Watabe M, et al. Among authors: arjunan snv. Phys Rev E. 2019 Jul;100(1-1):010402. doi: 10.1103/PhysRevE.100.010402. Phys Rev E. 2019. PMID: 31499827

7

Surface reaction-diffusion kinetics on lattice at the microscopic scale.

Chew WX, Kaizu K, Watabe M, Muniandy SV, Takahashi K, Arjunan SNV. Chew WX, et al. Among authors: arjunan snv. Phys Rev E. 2019 Apr;99(4-1):042411. doi: 10.1103/PhysRevE.99.042411. Phys Rev E. 2019. PMID: 31108654

8

Multi-Algorithm Particle Simulations with Spatiocyte.

Arjunan SNV, Takahashi K. Arjunan SNV, et al. Methods Mol Biol. 2017;1611:219-236. doi: 10.1007/978-1-4939-7015-5_16. Methods Mol Biol. 2017. PMID: 28451982

9

A Computational Framework for Bioimaging Simulation.

Watabe M, Arjunan SN, Fukushima S, Iwamoto K, Kozuka J, Matsuoka S, Shindo Y, Ueda M, Takahashi K. Watabe M, et al. Among authors: arjunan sn. PLoS One. 2015 Jul 6;10(7):e0130089. doi: 10.1371/journal.pone.0130089. eCollection 2015. PLoS One. 2015. PMID: 26147508 Free PMC article.

10

An evolutionary firefly algorithm for the estimation of nonlinear biological model parameters.

Abdullah A, Deris S, Anwar S, Arjunan SN. Abdullah A, et al. Among authors: arjunan sn. PLoS One. 2013;8(3):e56310. doi: 10.1371/journal.pone.0056310. Epub 2013 Mar 4. PLoS One. 2013. PMID: 23469172 Free PMC article.

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