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Automated tracking of whiskers in videos of head fixed rodents.
Clack NG, O'Connor DH, Huber D, Petreanu L, Hires A, Peron S, Svoboda K, Myers EW. Clack NG, et al. PLoS Comput Biol. 2012;8(7):e1002591. doi: 10.1371/journal.pcbi.1002591. Epub 2012 Jul 5. PLoS Comput Biol. 2012. PMID: 22792058 Free PMC article.
We have developed software for fully automated tracking of vibrissae (whiskers) in high-speed videos (>500 Hz) of head-fixed, behaving rodents trimmed to a single row of whiskers. ...The average processing rate for …
We have developed software for fully automated tracking of vibrissae (whiskers) in high-speed videos (&gt …
An open-source high-speed infrared videography database to study the principles of active sensing in freely navigating rodents.
Azarfar A, Zhang Y, Alishbayli A, Miceli S, Kepser L, van der Wielen D, van de Moosdijk M, Homberg J, Schubert D, Proville R, Celikel T. Azarfar A, et al. Gigascience. 2018 Dec 1;7(12):giy134. doi: 10.1093/gigascience/giy134. Gigascience. 2018. PMID: 30418576 Free PMC article.
Here, we provide 6,642 videos as freely moving juvenile (third to fourth postnatal week) and adult rodents explore a stationary object on the gap-crossing task. ...The dataset includes varying background illumination conditions and signal-to-noise ratios (SNRs), ran …
Here, we provide 6,642 videos as freely moving juvenile (third to fourth postnatal week) and adult rodents explore a stationar …
Pixying Behavior: A Versatile Real-Time and Post Hoc Automated Optical Tracking Method for Freely Moving and Head Fixed Animals.
Nashaat MA, Oraby H, Peña LB, Dominiak S, Larkum ME, Sachdev RN. Nashaat MA, et al. eNeuro. 2017 Feb 20;4(1):ENEURO.0245-16.2017. doi: 10.1523/ENEURO.0245-16.2017. eCollection 2017 Jan-Feb. eNeuro. 2017. PMID: 28275712 Free PMC article.
Here, we describe an automated optical method for tracking animal behavior in both head-fixed and freely moving animals, in real time and offline. It takes advantage of an off-the-shelf camera system, the Pixy camera, designed as a fast vision sensor f …
Here, we describe an automated optical method for tracking animal behavior in both head-fixed and freely moving …