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4-O-methylation of glucuronic acid in Arabidopsis glucuronoxylan is catalyzed by a domain of unknown function family 579 protein.
Urbanowicz BR, Peña MJ, Ratnaparkhe S, Avci U, Backe J, Steet HF, Foston M, Li H, O'Neill MA, Ragauskas AJ, Darvill AG, Wyman C, Gilbert HJ, York WS. Urbanowicz BR, et al. Among authors: avci u. Proc Natl Acad Sci U S A. 2012 Aug 28;109(35):14253-8. doi: 10.1073/pnas.1208097109. Epub 2012 Aug 14. Proc Natl Acad Sci U S A. 2012. PMID: 22893684 Free PMC article.
A comprehensive toolkit of plant cell wall glycan-directed monoclonal antibodies.
Pattathil S, Avci U, Baldwin D, Swennes AG, McGill JA, Popper Z, Bootten T, Albert A, Davis RH, Chennareddy C, Dong R, O'Shea B, Rossi R, Leoff C, Freshour G, Narra R, O'Neil M, York WS, Hahn MG. Pattathil S, et al. Among authors: avci u. Plant Physiol. 2010 Jun;153(2):514-25. doi: 10.1104/pp.109.151985. Epub 2010 Apr 2. Plant Physiol. 2010. PMID: 20363856 Free PMC article.
An Arabidopsis cell wall proteoglycan consists of pectin and arabinoxylan covalently linked to an arabinogalactan protein.
Tan L, Eberhard S, Pattathil S, Warder C, Glushka J, Yuan C, Hao Z, Zhu X, Avci U, Miller JS, Baldwin D, Pham C, Orlando R, Darvill A, Hahn MG, Kieliszewski MJ, Mohnen D. Tan L, et al. Among authors: avci u. Plant Cell. 2013 Jan;25(1):270-87. doi: 10.1105/tpc.112.107334. Epub 2013 Jan 31. Plant Cell. 2013. PMID: 23371948 Free PMC article.
Galactose-depleted xyloglucan is dysfunctional and leads to dwarfism in Arabidopsis.
Kong Y, Peña MJ, Renna L, Avci U, Pattathil S, Tuomivaara ST, Li X, Reiter WD, Brandizzi F, Hahn MG, Darvill AG, York WS, O'Neill MA. Kong Y, et al. Among authors: avci u. Plant Physiol. 2015 Apr;167(4):1296-306. doi: 10.1104/pp.114.255943. Epub 2015 Feb 11. Plant Physiol. 2015. PMID: 25673778 Free PMC article.
Xyloglucan, galactomannan, glucuronoxylan, and rhamnogalacturonan I do not have identical structures in soybean root and root hair cell walls.
Muszyński A, O'Neill MA, Ramasamy E, Pattathil S, Avci U, Peña MJ, Libault M, Hossain MS, Brechenmacher L, York WS, Barbosa RM, Hahn MG, Stacey G, Carlson RW. Muszyński A, et al. Among authors: avci u. Planta. 2015 Nov;242(5):1123-38. doi: 10.1007/s00425-015-2344-y. Epub 2015 Jun 12. Planta. 2015. PMID: 26067758
Loss of function of folylpolyglutamate synthetase 1 reduces lignin content and improves cell wall digestibility in Arabidopsis.
Srivastava AC, Chen F, Ray T, Pattathil S, Peña MJ, Avci U, Li H, Huhman DV, Backe J, Urbanowicz B, Miller JS, Bedair M, Wyman CE, Sumner LW, York WS, Hahn MG, Dixon RA, Blancaflor EB, Tang Y. Srivastava AC, et al. Among authors: avci u. Biotechnol Biofuels. 2015 Dec 21;8:224. doi: 10.1186/s13068-015-0403-z. eCollection 2015. Biotechnol Biofuels. 2015. PMID: 26697113 Free PMC article.
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