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Table representation of search results timeline featuring number of search results per year.
Year | Number of Results |
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2019 | 1 |
2020 | 2 |
2021 | 2 |
2022 | 1 |
2024 | 0 |
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6 results
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Page 1
Addressing barriers in comprehensiveness, accessibility, reusability, interoperability and reproducibility of computational models in systems biology.
Brief Bioinform. 2022 Jul 18;23(4):bbac212. doi: 10.1093/bib/bbac212.
Brief Bioinform. 2022.
PMID: 35671510
Free PMC article.
Reproducibility in systems biology modelling.
Tiwari K, Kananathan S, Roberts MG, Meyer JP, Sharif Shohan MU, Xavier A, Maire M, Zyoud A, Men J, Ng S, Nguyen TVN, Glont M, Hermjakob H, Malik-Sheriff RS.
Tiwari K, et al.
Mol Syst Biol. 2021 Feb;17(2):e9982. doi: 10.15252/msb.20209982.
Mol Syst Biol. 2021.
PMID: 33620773
Free PMC article.
Item in Clipboard
SBML Level 3: an extensible format for the exchange and reuse of biological models.
Keating SM, Waltemath D, König M, Zhang F, Dräger A, Chaouiya C, Bergmann FT, Finney A, Gillespie CS, Helikar T, Hoops S, Malik-Sheriff RS, Moodie SL, Moraru II, Myers CJ, Naldi A, Olivier BG, Sahle S, Schaff JC, Smith LP, Swat MJ, Thieffry D, Watanabe L, Wilkinson DJ, Blinov ML, Begley K, Faeder JR, Gómez HF, Hamm TM, Inagaki Y, Liebermeister W, Lister AL, Lucio D, Mjolsness E, Proctor CJ, Raman K, Rodriguez N, Shaffer CA, Shapiro BE, Stelling J, Swainston N, Tanimura N, Wagner J, Meier-Schellersheim M, Sauro HM, Palsson B, Bolouri H, Kitano H, Funahashi A, Hermjakob H, Doyle JC, Hucka M; SBML Level 3 Community members.
Keating SM, et al.
Mol Syst Biol. 2020 Aug;16(8):e9110. doi: 10.15252/msb.20199110.
Mol Syst Biol. 2020.
PMID: 32845085
Free PMC article.
Review.
Item in Clipboard
BioModels Parameters: a treasure trove of parameter values from published systems biology models.
Glont M, Arankalle C, Tiwari K, Nguyen TVN, Hermjakob H, Malik-Sheriff RS.
Glont M, et al.
Bioinformatics. 2020 Nov 1;36(17):4649-4654. doi: 10.1093/bioinformatics/btaa560.
Bioinformatics. 2020.
PMID: 32573648
Free PMC article.
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Setting the basis of best practices and standards for curation and annotation of logical models in biology-highlights of the [BC]2 2019 CoLoMoTo/SysMod Workshop.
Niarakis A, Kuiper M, Ostaszewski M, Malik Sheriff RS, Casals-Casas C, Thieffry D, Freeman TC, Thomas P, Touré V, Noël V, Stoll G, Saez-Rodriguez J, Naldi A, Oshurko E, Xenarios I, Soliman S, Chaouiya C, Helikar T, Calzone L.
Niarakis A, et al.
Brief Bioinform. 2021 Mar 22;22(2):1848-1859. doi: 10.1093/bib/bbaa046.
Brief Bioinform. 2021.
PMID: 32313939
Free PMC article.
Review.
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Best Practices to Maximize the Use and Reuse of Quantitative and Systems Pharmacology Models: Recommendations From the United Kingdom Quantitative and Systems Pharmacology Network.
Cucurull-Sanchez L, Chappell MJ, Chelliah V, Amy Cheung SY, Derks G, Penney M, Phipps A, Malik-Sheriff RS, Timmis J, Tindall MJ, van der Graaf PH, Vicini P, Yates JWT.
Cucurull-Sanchez L, et al.
CPT Pharmacometrics Syst Pharmacol. 2019 May;8(5):259-272. doi: 10.1002/psp4.12381. Epub 2019 Mar 22.
CPT Pharmacometrics Syst Pharmacol. 2019.
PMID: 30667172
Free PMC article.
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