Baele G - Search Results

1

BEAGLE 3: Improved Performance, Scaling, and Usability for a High-Performance Computing Library for Statistical Phylogenetics.

Ayres DL, Cummings MP, Baele G, Darling AE, Lewis PO, Swofford DL, Huelsenbeck JP, Lemey P, Rambaut A, Suchard MA. Ayres DL, et al. Among authors: baele g. Syst Biol. 2019 Nov 1;68(6):1052-1061. doi: 10.1093/sysbio/syz020. Syst Biol. 2019. PMID: 31034053 Free PMC article.

2

Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty.

Baele G, Lemey P, Bedford T, Rambaut A, Suchard MA, Alekseyenko AV. Baele G, et al. Mol Biol Evol. 2012 Sep;29(9):2157-67. doi: 10.1093/molbev/mss084. Epub 2012 Mar 7. Mol Biol Evol. 2012. PMID: 22403239 Free PMC article.

3

Accurate model selection of relaxed molecular clocks in bayesian phylogenetics.

Baele G, Li WL, Drummond AJ, Suchard MA, Lemey P. Baele G, et al. Mol Biol Evol. 2013 Feb;30(2):239-43. doi: 10.1093/molbev/mss243. Epub 2012 Oct 22. Mol Biol Evol. 2013. PMID: 23090976 Free PMC article.

4

Make the most of your samples: Bayes factor estimators for high-dimensional models of sequence evolution.

Baele G, Lemey P, Vansteelandt S. Baele G, et al. BMC Bioinformatics. 2013 Mar 6;14:85. doi: 10.1186/1471-2105-14-85. BMC Bioinformatics. 2013. PMID: 23497171 Free PMC article.

5

Bayesian evolutionary model testing in the phylogenomics era: matching model complexity with computational efficiency.

Baele G, Lemey P. Baele G, et al. Bioinformatics. 2013 Aug 15;29(16):1970-9. doi: 10.1093/bioinformatics/btt340. Epub 2013 Jun 12. Bioinformatics. 2013. PMID: 23766415

6

Unifying viral genetics and human transportation data to predict the global transmission dynamics of human influenza H3N2.

Lemey P, Rambaut A, Bedford T, Faria N, Bielejec F, Baele G, Russell CA, Smith DJ, Pybus OG, Brockmann D, Suchard MA. Lemey P, et al. Among authors: baele g. PLoS Pathog. 2014 Feb 20;10(2):e1003932. doi: 10.1371/journal.ppat.1003932. eCollection 2014 Feb. PLoS Pathog. 2014. PMID: 24586153 Free PMC article.

7

Inferring heterogeneous evolutionary processes through time: from sequence substitution to phylogeography.

Bielejec F, Lemey P, Baele G, Rambaut A, Suchard MA. Bielejec F, et al. Among authors: baele g. Syst Biol. 2014 Jul;63(4):493-504. doi: 10.1093/sysbio/syu015. Epub 2014 Mar 12. Syst Biol. 2014. PMID: 24627184 Free PMC article.

8

The genealogical population dynamics of HIV-1 in a large transmission chain: bridging within and among host evolutionary rates.

Vrancken B, Rambaut A, Suchard MA, Drummond A, Baele G, Derdelinckx I, Van Wijngaerden E, Vandamme AM, Van Laethem K, Lemey P. Vrancken B, et al. Among authors: baele g. PLoS Comput Biol. 2014 Apr 3;10(4):e1003505. doi: 10.1371/journal.pcbi.1003505. eCollection 2014 Apr. PLoS Comput Biol. 2014. PMID: 24699231 Free PMC article.

9

Air travel is associated with intracontinental spread of dengue virus serotypes 1-3 in Brazil.

Nunes MR, Palacios G, Faria NR, Sousa EC Jr, Pantoja JA, Rodrigues SG, Carvalho VL, Medeiros DB, Savji N, Baele G, Suchard MA, Lemey P, Vasconcelos PF, Lipkin WI. Nunes MR, et al. Among authors: baele g. PLoS Negl Trop Dis. 2014 Apr 17;8(4):e2769. doi: 10.1371/journal.pntd.0002769. eCollection 2014 Apr. PLoS Negl Trop Dis. 2014. PMID: 24743730 Free PMC article.

10

πBUSS: a parallel BEAST/BEAGLE utility for sequence simulation under complex evolutionary scenarios.

Bielejec F, Lemey P, Carvalho LM, Baele G, Rambaut A, Suchard MA. Bielejec F, et al. Among authors: baele g. BMC Bioinformatics. 2014 May 7;15:133. doi: 10.1186/1471-2105-15-133. BMC Bioinformatics. 2014. PMID: 24885610 Free PMC article.

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