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Navigating the future of bacterial molecular epidemiology.
Baker S, Hanage WP, Holt KE. Baker S, et al. Curr Opin Microbiol. 2010 Oct;13(5):640-5. doi: 10.1016/j.mib.2010.08.002. Epub 2010 Sep 16. Curr Opin Microbiol. 2010. PMID: 20846899 Free PMC article. Review.
Detection of Vi-negative Salmonella enterica serovar typhi in the peripheral blood of patients with typhoid fever in the Faisalabad region of Pakistan.
Baker S, Sarwar Y, Aziz H, Haque A, Ali A, Dougan G, Wain J, Haque A. Baker S, et al. J Clin Microbiol. 2005 Sep;43(9):4418-25. doi: 10.1128/JCM.43.9.4418-4425.2005. J Clin Microbiol. 2005. PMID: 16145086 Free PMC article.
A linear plasmid truncation induces unidirectional flagellar phase change in H:z66 positive Salmonella Typhi.
Baker S, Holt K, Whitehead S, Goodhead I, Perkins T, Stocker B, Hardy J, Dougan G. Baker S, et al. Mol Microbiol. 2007 Dec;66(5):1207-18. doi: 10.1111/j.1365-2958.2007.05995.x. Epub 2007 Nov 1. Mol Microbiol. 2007. PMID: 17976161 Free PMC article.
Salmonella Typhi (S. Typhi) is normally not capable of phase variation of flagellar antigen expression as isolates only harbour the fliC gene (H:d) and lacks an equivalent fljB locus. However, some S. Typhi isolates, exclusively from Indonesia, harbour an fljB equiv …
Salmonella Typhi (S. Typhi) is normally not capable of phase variation of flagellar antigen expression as isolates only harbour the f …
Molecular characterization of the Salmonella enterica serovar Typhi Vi-typing bacteriophage E1.
Pickard D, Thomson NR, Baker S, Wain J, Pardo M, Goulding D, Hamlin N, Choudhary J, Threfall J, Dougan G. Pickard D, et al. Among authors: baker s. J Bacteriol. 2008 Apr;190(7):2580-7. doi: 10.1128/JB.01654-07. Epub 2008 Jan 11. J Bacteriol. 2008. PMID: 18192390 Free PMC article.
The absolute requirement for Vi capsule expression for infectivity was demonstrated using different Vi-negative S. enterica derivatives. ...The genome is 45,362 bp in length with defined capsid and tail regions that exhibit significant homology to the S. enterica tr …
The absolute requirement for Vi capsule expression for infectivity was demonstrated using different Vi-negative S. enterica derivativ …
High-throughput genotyping of Salmonella enterica serovar Typhi allowing geographical assignment of haplotypes and pathotypes within an urban District of Jakarta, Indonesia.
Baker S, Holt K, van de Vosse E, Roumagnac P, Whitehead S, King E, Ewels P, Keniry A, Weill FX, Lightfoot D, van Dissel JT, Sanderson KE, Farrar J, Achtman M, Deloukas P, Dougan G. Baker S, et al. J Clin Microbiol. 2008 May;46(5):1741-6. doi: 10.1128/JCM.02249-07. Epub 2008 Mar 5. J Clin Microbiol. 2008. PMID: 18322069 Free PMC article.
Mobilization of the incQ plasmid R300B with a chromosomal conjugation system in Salmonella enterica serovar typhi.
Baker S, Pickard D, Whitehead S, Farrar J, Dougan G. Baker S, et al. J Bacteriol. 2008 Jun;190(11):4084-7. doi: 10.1128/JB.00065-08. Epub 2008 Apr 4. J Bacteriol. 2008. PMID: 18390666 Free PMC article.
High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi.
Holt KE, Parkhill J, Mazzoni CJ, Roumagnac P, Weill FX, Goodhead I, Rance R, Baker S, Maskell DJ, Wain J, Dolecek C, Achtman M, Dougan G. Holt KE, et al. Among authors: baker s. Nat Genet. 2008 Aug;40(8):987-93. doi: 10.1038/ng.195. Epub 2008 Jul 27. Nat Genet. 2008. PMID: 18660809 Free PMC article.
Fatal wound infection caused by Chromobacterium violaceum in Ho Chi Minh City, Vietnam.
Baker S, Campbell JI, Stabler R, Nguyen HV, To DS, Nguyen DV, Farrar J. Baker S, et al. J Clin Microbiol. 2008 Nov;46(11):3853-5. doi: 10.1128/JCM.01068-08. Epub 2008 Sep 17. J Clin Microbiol. 2008. PMID: 18799697 Free PMC article.
High prevalence of plasmid-mediated quinolone resistance determinants in commensal members of the Enterobacteriaceae in Ho Chi Minh City, Vietnam.
Minh Vien LT, Baker S, Phuong Thao LT, Phuong Tu LT, Thu Thuy C, Thu Nga TT, Minh Hoang NV, Campbell JI, Minh Yen L, Trong Hieu N, Vinh Chau NV, Farrar J, Schultsz C. Minh Vien LT, et al. Among authors: baker s. J Med Microbiol. 2009 Dec;58(Pt 12):1585-1592. doi: 10.1099/jmm.0.010033-0. Epub 2009 Aug 20. J Med Microbiol. 2009. PMID: 19696153 Free PMC article.
Searching for the elusive typhoid diagnostic.
Baker S, Favorov M, Dougan G. Baker S, et al. BMC Infect Dis. 2010 Mar 5;10:45. doi: 10.1186/1471-2334-10-45. BMC Infect Dis. 2010. PMID: 20205702 Free PMC article. Review.
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