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Deep phenotyping of 34,128 adult patients hospitalised with COVID-19 in an international network study.
Burn E, You SC, Sena AG, Kostka K, Abedtash H, Abrahão MTF, Alberga A, Alghoul H, Alser O, Alshammari TM, Aragon M, Areia C, Banda JM, Cho J, Culhane AC, Davydov A, DeFalco FJ, Duarte-Salles T, DuVall S, Falconer T, Fernandez-Bertolin S, Gao W, Golozar A, Hardin J, Hripcsak G, Huser V, Jeon H, Jing Y, Jung CY, Kaas-Hansen BS, Kaduk D, Kent S, Kim Y, Kolovos S, Lane JCE, Lee H, Lynch KE, Makadia R, Matheny ME, Mehta PP, Morales DR, Natarajan K, Nyberg F, Ostropolets A, Park RW, Park J, Posada JD, Prats-Uribe A, Rao G, Reich C, Rho Y, Rijnbeek P, Schilling LM, Schuemie M, Shah NH, Shoaibi A, Song S, Spotnitz M, Suchard MA, Swerdel JN, Vizcaya D, Volpe S, Wen H, Williams AE, Yimer BB, Zhang L, Zhuk O, Prieto-Alhambra D, Ryan P. Burn E, et al. Among authors: banda jm. Nat Commun. 2020 Oct 6;11(1):5009. doi: 10.1038/s41467-020-18849-z. Nat Commun. 2020. PMID: 33024121 Free PMC article.
Risk of hydroxychloroquine alone and in combination with azithromycin in the treatment of rheumatoid arthritis: a multinational, retrospective study.
Lane JCE, Weaver J, Kostka K, Duarte-Salles T, Abrahao MTF, Alghoul H, Alser O, Alshammari TM, Biedermann P, Banda JM, Burn E, Casajust P, Conover MM, Culhane AC, Davydov A, DuVall SL, Dymshyts D, Fernandez-Bertolin S, Fišter K, Hardin J, Hester L, Hripcsak G, Kaas-Hansen BS, Kent S, Khosla S, Kolovos S, Lambert CG, van der Lei J, Lynch KE, Makadia R, Margulis AV, Matheny ME, Mehta P, Morales DR, Morgan-Stewart H, Mosseveld M, Newby D, Nyberg F, Ostropolets A, Park RW, Prats-Uribe A, Rao GA, Reich C, Reps J, Rijnbeek P, Sathappan SMK, Schuemie M, Seager S, Sena AG, Shoaibi A, Spotnitz M, Suchard MA, Torre CO, Vizcaya D, Wen H, de Wilde M, Xie J, You SC, Zhang L, Zhuk O, Ryan P, Prieto-Alhambra D; OHDSI-COVID-19 consortium. Lane JCE, et al. Among authors: banda jm. Lancet Rheumatol. 2020 Nov;2(11):e698-e711. doi: 10.1016/S2665-9913(20)30276-9. Epub 2020 Aug 21. Lancet Rheumatol. 2020. PMID: 32864627 Free PMC article.
Clinical decision support tool for phototherapy initiation in preterm infants.
Arain Y, Banda JM, Faulkenberry J, Bhutani VK, Palma JP. Arain Y, et al. Among authors: banda jm. J Perinatol. 2020 Oct;40(10):1518-1523. doi: 10.1038/s41372-020-00782-0. Epub 2020 Aug 13. J Perinatol. 2020. PMID: 32792630 Free article.
Social Media Mining Toolkit (SMMT).
Tekumalla R, Banda JM. Tekumalla R, et al. Among authors: banda jm. Genomics Inform. 2020 Jun;18(2):e16. doi: 10.5808/GI.2020.18.2.e16. Epub 2020 Jun 15. Genomics Inform. 2020. PMID: 32634870 Free PMC article.
The Rajarata Pregnancy Cohort (RaPCo): study protocol.
Agampodi TC, Wickramasinghe ND, Prasanna RIR, Irangani MKL, Banda JMS, Jayathilake PMB, Hettiarachchi A, Amarasinghe G, Jayasinghe I, Koralagedara I, Gunarathne SP, Wickramage S, Warnasekara J, Lokunarangoda N, Mendis V, Dissanayaka AK, Premadasa J, Hettigama N, Koralagedara D, Weerasinghe M, Malawanage K, Jayakodi H, Wickramasinghe A, Agampodi SB. Agampodi TC, et al. Among authors: banda jms. BMC Pregnancy Childbirth. 2020 Jun 26;20(1):374. doi: 10.1186/s12884-020-03056-x. BMC Pregnancy Childbirth. 2020. PMID: 32586287 Free PMC article.
A large-scale COVID-19 Twitter chatter dataset for open scientific research -- an international collaboration.
Banda JM, Tekumalla R, Wang G, Yu J, Liu T, Ding Y, Chowell G. Banda JM, et al. ArXiv. 2020 Apr 7:arXiv:2004.03688v1. Preprint. ArXiv. 2020. PMID: 32550247 Free PMC article.
An international characterisation of patients hospitalised with COVID-19 and a comparison with those previously hospitalised with influenza.
Burn E, You SC, Sena AG, Kostka K, Abedtash H, Abrahão MTF, Alberga A, Alghoul H, Alser O, Alshammari TM, Areia C, Banda JM, Cho J, Culhane AC, Davydov A, DeFalco FJ, Duarte-Salles T, DuVall S, Falconer T, Gao W, Golozar A, Hardin J, Hripcsak G, Huser V, Jeon H, Jing Y, Jung CY, Kaas-Hansen BS, Kaduk D, Kent S, Kim Y, Kolovos S, Lane JCE, Lee H, Lynch KE, Makadia R, Matheny ME, Mehta P, Morales DR, Natarajan K, Nyberg F, Ostropolets A, Park RW, Park J, Posada JD, Prats-Uribe A, Rao G, Reich C, Rho Y, Rijnbeek P, Sathappan SMK, Schilling LM, Schuemie M, Shah NH, Shoaibi A, Song S, Spotnitz M, Suchard MA, Swerdel JN, Vizcaya D, Volpe S, Wen H, Williams AE, Yimer BB, Zhang L, Zhuk O, Prieto-Alhambra D, Ryan P. Burn E, et al. Among authors: banda jm. medRxiv. 2020 Apr 25:2020.04.22.20074336. doi: 10.1101/2020.04.22.20074336. Preprint. medRxiv. 2020. PMID: 32511443 Free PMC article.
Ten simple rules to run a successful BioHackathon.
Garcia L, Antezana E, Garcia A, Bolton E, Jimenez R, Prins P, Banda JM, Katayama T. Garcia L, et al. Among authors: banda jm. PLoS Comput Biol. 2020 May 7;16(5):e1007808. doi: 10.1371/journal.pcbi.1007808. eCollection 2020 May. PLoS Comput Biol. 2020. PMID: 32379758 Free PMC article. No abstract available.
Development and validation of phenotype classifiers across multiple sites in the observational health data sciences and informatics network.
Kashyap M, Seneviratne M, Banda JM, Falconer T, Ryu B, Yoo S, Hripcsak G, Shah NH. Kashyap M, et al. Among authors: banda jm. J Am Med Inform Assoc. 2020 Jun 1;27(6):877-883. doi: 10.1093/jamia/ocaa032. J Am Med Inform Assoc. 2020. PMID: 32374408 Free PMC article.
Fully connecting the Observational Health Data Science and Informatics (OHDSI) initiative with the world of linked open data.
Banda JM. Banda JM. Genomics Inform. 2019 Jun;17(2):e13. doi: 10.5808/GI.2019.17.2.e13. Epub 2019 Jun 11. Genomics Inform. 2019. PMID: 31307128 Free PMC article.
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