Banfield JF - Search Results

1

A semi-quantitative, synteny-based method to improve functional predictions for hypothetical and poorly annotated bacterial and archaeal genes.

Yelton AP, Thomas BC, Simmons SL, Wilmes P, Zemla A, Thelen MP, Justice N, Banfield JF. Yelton AP, et al. Among authors: banfield jf. PLoS Comput Biol. 2011 Oct;7(10):e1002230. doi: 10.1371/journal.pcbi.1002230. Epub 2011 Oct 20. PLoS Comput Biol. 2011. PMID: 22028637 Free PMC article.

2

Community proteomics of a natural microbial biofilm.

Ram RJ, Verberkmoes NC, Thelen MP, Tyson GW, Baker BJ, Blake RC 2nd, Shah M, Hettich RL, Banfield JF. Ram RJ, et al. Among authors: banfield jf. Science. 2005 Jun 24;308(5730):1915-20. Epub 2005 May 5. Science. 2005. PMID: 15879173

3

Proteogenomic approaches for the molecular characterization of natural microbial communities.

Banfield JF, Verberkmoes NC, Hettich RL, Thelen MP. Banfield JF, et al. OMICS. 2005 Winter;9(4):301-33. doi: 10.1089/omi.2005.9.301. OMICS. 2005. PMID: 16402891

4

Genome dynamics in a natural archaeal population.

Allen EE, Tyson GW, Whitaker RJ, Detter JC, Richardson PM, Banfield JF. Allen EE, et al. Among authors: banfield jf. Proc Natl Acad Sci U S A. 2007 Feb 6;104(6):1883-8. doi: 10.1073/pnas.0604851104. Epub 2007 Jan 31. Proc Natl Acad Sci U S A. 2007. PMID: 17267615 Free PMC article.

5

Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria.

Lo I, Denef VJ, Verberkmoes NC, Shah MB, Goltsman D, DiBartolo G, Tyson GW, Allen EE, Ram RJ, Detter JC, Richardson P, Thelen MP, Hettich RL, Banfield JF. Lo I, et al. Among authors: banfield jf. Nature. 2007 Mar 29;446(7135):537-41. doi: 10.1038/nature05624. Epub 2007 Mar 7. Nature. 2007. PMID: 17344860

6

Genetic exchange across a species boundary in the archaeal genus ferroplasma.

Eppley JM, Tyson GW, Getz WM, Banfield JF. Eppley JM, et al. Among authors: banfield jf. Genetics. 2007 Sep;177(1):407-16. doi: 10.1534/genetics.107.072892. Epub 2007 Jul 1. Genetics. 2007. PMID: 17603112 Free PMC article.

7

Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal.

Wilmes P, Andersson AF, Lefsrud MG, Wexler M, Shah M, Zhang B, Hettich RL, Bond PL, VerBerkmoes NC, Banfield JF. Wilmes P, et al. Among authors: banfield jf. ISME J. 2008 Aug;2(8):853-64. doi: 10.1038/ismej.2008.38. Epub 2008 May 1. ISME J. 2008. PMID: 18449217 Free article.

8

Characterization of cytochrome 579, an unusual cytochrome isolated from an iron-oxidizing microbial community.

Singer SW, Chan CS, Zemla A, VerBerkmoes NC, Hwang M, Hettich RL, Banfield JF, Thelen MP. Singer SW, et al. Among authors: banfield jf. Appl Environ Microbiol. 2008 Jul;74(14):4454-62. doi: 10.1128/AEM.02799-07. Epub 2008 May 9. Appl Environ Microbiol. 2008. PMID: 18469132 Free PMC article.

9

Population genomic analysis of strain variation in Leptospirillum group II bacteria involved in acid mine drainage formation.

Simmons SL, Dibartolo G, Denef VJ, Goltsman DS, Thelen MP, Banfield JF. Simmons SL, et al. Among authors: banfield jf. PLoS Biol. 2008 Jul 22;6(7):e177. doi: 10.1371/journal.pbio.0060177. PLoS Biol. 2008. PMID: 18651792 Free PMC article.

10

Natural acidophilic biofilm communities reflect distinct organismal and functional organization.

Wilmes P, Remis JP, Hwang M, Auer M, Thelen MP, Banfield JF. Wilmes P, et al. Among authors: banfield jf. ISME J. 2009 Feb;3(2):266-70. doi: 10.1038/ismej.2008.90. Epub 2008 Oct 9. ISME J. 2009. PMID: 18843299 Free article.

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