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991 results
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Groove width and depth of B-DNA structures depend on local variation in slide.
Bhattacharyya D, Bansal M. Bhattacharyya D, et al. Among authors: bansal m. J Biomol Struct Dyn. 1992 Aug;10(1):213-26. doi: 10.1080/07391102.1992.10508639. J Biomol Struct Dyn. 1992. PMID: 1418742
Characterization of structural and free energy properties of promoters associated with Primary and Operon TSS in Helicobacter pylori genome and their orthologs.
Kumar A, Bansal M. Kumar A, et al. Among authors: bansal m. J Biosci. 2012 Jul;37(3):423-31. doi: 10.1007/s12038-012-9214-6. J Biosci. 2012. PMID: 22750980
Dissecting π-helices: sequence, structure and function.
Kumar P, Bansal M. Kumar P, et al. Among authors: bansal m. FEBS J. 2015 Nov;282(22):4415-32. doi: 10.1111/febs.13507. Epub 2015 Oct 3. FEBS J. 2015. PMID: 26370783
Identification of local variations within secondary structures of proteins.
Kumar P, Bansal M. Kumar P, et al. Among authors: bansal m. Acta Crystallogr D Biol Crystallogr. 2015 May;71(Pt 5):1077-86. doi: 10.1107/S1399004715003144. Epub 2015 Apr 24. Acta Crystallogr D Biol Crystallogr. 2015. PMID: 25945573
Sequence and conformational preferences at termini of α-helices in membrane proteins: role of the helix environment.
Shelar A, Bansal M. Shelar A, et al. Among authors: bansal m. Proteins. 2014 Dec;82(12):3420-36. doi: 10.1002/prot.24696. Epub 2014 Oct 10. Proteins. 2014. PMID: 25257385
HELANAL-Plus: a web server for analysis of helix geometry in protein structures.
Kumar P, Bansal M. Kumar P, et al. Among authors: bansal m. J Biomol Struct Dyn. 2012;30(6):773-83. doi: 10.1080/07391102.2012.689705. Epub 2012 Jun 26. J Biomol Struct Dyn. 2012. PMID: 22734588 No abstract available.
An ensemble of B-DNA dinucleotide geometries lead to characteristic nucleosomal DNA structure and provide plasticity required for gene expression.
Marathe A, Bansal M. Marathe A, et al. Among authors: bansal m. BMC Struct Biol. 2011 Jan 5;11:1. doi: 10.1186/1472-6807-11-1. BMC Struct Biol. 2011. PMID: 21208404 Free PMC article.
High-quality annotation of promoter regions for 913 bacterial genomes.
Rangannan V, Bansal M. Rangannan V, et al. Among authors: bansal m. Bioinformatics. 2010 Dec 15;26(24):3043-50. doi: 10.1093/bioinformatics/btq577. Epub 2010 Oct 17. Bioinformatics. 2010. PMID: 20956245
The 5-methyl group in thymine dynamically influences the structure of A-tracts in DNA at the local and global level.
Marathe A, Bansal M. Marathe A, et al. Among authors: bansal m. J Phys Chem B. 2010 Apr 29;114(16):5534-46. doi: 10.1021/jp911055x. J Phys Chem B. 2010. PMID: 20373819
Relative stability of DNA as a generic criterion for promoter prediction: whole genome annotation of microbial genomes with varying nucleotide base composition.
Rangannan V, Bansal M. Rangannan V, et al. Among authors: bansal m. Mol Biosyst. 2009 Dec;5(12):1758-69. doi: 10.1039/B906535K. Mol Biosyst. 2009. PMID: 19593472
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