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Structure and activity of the RNA-targeting Type III-B CRISPR-Cas complex of Thermus thermophilus.
Staals RHJ, Agari Y, Maki-Yonekura S, Zhu Y, Taylor DW, van Duijn E, Barendregt A, Vlot M, Koehorst JJ, Sakamoto K, Masuda A, Dohmae N, Schaap PJ, Doudna JA, Heck AJR, Yonekura K, van der Oost J, Shinkai A. Staals RHJ, et al. Among authors: barendregt a. Mol Cell. 2013 Oct 10;52(1):135-145. doi: 10.1016/j.molcel.2013.09.013. Mol Cell. 2013. PMID: 24119403 Free PMC article.
Structural basis for CRISPR RNA-guided DNA recognition by Cascade.
Jore MM, Lundgren M, van Duijn E, Bultema JB, Westra ER, Waghmare SP, Wiedenheft B, Pul U, Wurm R, Wagner R, Beijer MR, Barendregt A, Zhou K, Snijders AP, Dickman MJ, Doudna JA, Boekema EJ, Heck AJ, van der Oost J, Brouns SJ. Jore MM, et al. Among authors: barendregt a. Nat Struct Mol Biol. 2011 May;18(5):529-36. doi: 10.1038/nsmb.2019. Epub 2011 Apr 3. Nat Struct Mol Biol. 2011. PMID: 21460843
RNA-guided complex from a bacterial immune system enhances target recognition through seed sequence interactions.
Wiedenheft B, van Duijn E, Bultema JB, Waghmare SP, Zhou K, Barendregt A, Westphal W, Heck AJ, Boekema EJ, Dickman MJ, Doudna JA. Wiedenheft B, et al. Among authors: barendregt a. Proc Natl Acad Sci U S A. 2011 Jun 21;108(25):10092-7. doi: 10.1073/pnas.1102716108. Epub 2011 May 2. Proc Natl Acad Sci U S A. 2011. PMID: 21536913 Free PMC article.
Native mass spectrometry provides direct evidence for DNA mismatch-induced regulation of asymmetric nucleotide binding in mismatch repair protein MutS.
Monti MC, Cohen SX, Fish A, Winterwerp HH, Barendregt A, Friedhoff P, Perrakis A, Heck AJ, Sixma TK, van den Heuvel RH, Lebbink JH. Monti MC, et al. Among authors: barendregt a. Nucleic Acids Res. 2011 Oct;39(18):8052-64. doi: 10.1093/nar/gkr498. Epub 2011 Jul 6. Nucleic Acids Res. 2011. PMID: 21737427 Free PMC article.
Kinetic and stoichiometric characterisation of streptavidin-binding aptamers.
Ruigrok VJ, van Duijn E, Barendregt A, Dyer K, Tainer JA, Stoltenburg R, Strehlitz B, Levisson M, Smidt H, van der Oost J. Ruigrok VJ, et al. Among authors: barendregt a. Chembiochem. 2012 Apr 16;13(6):829-36. doi: 10.1002/cbic.201100774. Epub 2012 Mar 13. Chembiochem. 2012. PMID: 22416028
82 results