Bastolla U - Search Results

1

How to guarantee optimal stability for most representative structures in the Protein Data Bank.

Bastolla U, Farwer J, Knapp EW, Vendruscolo M. Bastolla U, et al. Proteins. 2001 Aug 1;44(2):79-96. doi: 10.1002/prot.1075. Proteins. 2001. PMID: 11391771

2

Reconstruction of protein structures from a vectorial representation.

Porto M, Bastolla U, Roman HE, Vendruscolo M. Porto M, et al. Among authors: bastolla u. Phys Rev Lett. 2004 May 28;92(21):218101. doi: 10.1103/PhysRevLett.92.218101. Epub 2004 May 28. Phys Rev Lett. 2004. PMID: 15245321

3

Prediction of site-specific amino acid distributions and limits of divergent evolutionary changes in protein sequences.

Porto M, Roman HE, Vendruscolo M, Bastolla U. Porto M, et al. Among authors: bastolla u. Mol Biol Evol. 2005 Mar;22(3):630-8. doi: 10.1093/molbev/msi048. Epub 2004 Nov 10. Mol Biol Evol. 2005. PMID: 15537801

4

Detecting selection for negative design in proteins through an improved model of the misfolded state.

Minning J, Porto M, Bastolla U. Minning J, et al. Among authors: bastolla u. Proteins. 2013 Jul;81(7):1102-12. doi: 10.1002/prot.24244. Epub 2013 Apr 10. Proteins. 2013. PMID: 23280507

5

In memoriam. Angel Ramírez Ortiz (1966-2008).

Abia D, Bastolla U, Chacón P, Fábrega C, Gago F, Morreale A, Tramontano A. Abia D, et al. Among authors: bastolla u. Proteins. 2010 Jan;78(1):iii-viii. doi: 10.1002/prot.22660. Proteins. 2010. PMID: 19937956 No abstract available.

6

Quantifying the evolutionary divergence of protein structures: the role of function change and function conservation.

Pascual-García A, Abia D, Méndez R, Nido GS, Bastolla U. Pascual-García A, et al. Among authors: bastolla u. Proteins. 2010 Jan;78(1):181-96. doi: 10.1002/prot.22616. Proteins. 2010. PMID: 19830831

7

Effective connectivity profile: a structural representation that evidences the relationship between protein structures and sequences.

Bastolla U, Ortíz AR, Porto M, Teichert F. Bastolla U, et al. Proteins. 2008 Dec;73(4):872-88. doi: 10.1002/prot.22113. Proteins. 2008. PMID: 18536008

8

An efficient conformational sampling method for homology modeling.

Han R, Leo-Macias A, Zerbino D, Bastolla U, Contreras-Moreira B, Ortiz AR. Han R, et al. Among authors: bastolla u. Proteins. 2008 Apr;71(1):175-88. doi: 10.1002/prot.21672. Proteins. 2008. PMID: 17985353

9

Testing similarity measures with continuous and discrete protein models.

Wallin S, Farwer J, Bastolla U. Wallin S, et al. Among authors: bastolla u. Proteins. 2003 Jan 1;50(1):144-57. doi: 10.1002/prot.10271. Proteins. 2003. PMID: 12471607

10

Principal eigenvector of contact matrices and hydrophobicity profiles in proteins.

Bastolla U, Porto M, Roman HE, Vendruscolo M. Bastolla U, et al. Proteins. 2005 Jan 1;58(1):22-30. doi: 10.1002/prot.20240. Proteins. 2005. PMID: 15523667

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