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743 results
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Domains in gene silencing and cell differentiation proteins: the novel PAZ domain and redefinition of the Piwi domain.
Cerutti L, Mian N, Bateman A. Cerutti L, et al. Among authors: bateman a. Trends Biochem Sci. 2000 Oct;25(10):481-2. doi: 10.1016/s0968-0004(00)01641-8. Trends Biochem Sci. 2000. PMID: 11050429 No abstract available.
The YARHG domain: an extracellular domain in search of a function.
Coggill P, Bateman A. Coggill P, et al. Among authors: bateman a. PLoS One. 2012;7(5):e35575. doi: 10.1371/journal.pone.0035575. Epub 2012 May 17. PLoS One. 2012. PMID: 22615736 Free PMC article.
The SHOCT domain: a widespread domain under-represented in model organisms.
Eberhardt RY, Bartholdson SJ, Punta M, Bateman A. Eberhardt RY, et al. Among authors: bateman a. PLoS One. 2013;8(2):e57848. doi: 10.1371/journal.pone.0057848. Epub 2013 Feb 25. PLoS One. 2013. PMID: 23451277 Free PMC article.
Quantifying the mechanisms of domain gain in animal proteins.
Buljan M, Frankish A, Bateman A. Buljan M, et al. Among authors: bateman a. Genome Biol. 2010;11(7):R74. doi: 10.1186/gb-2010-11-7-r74. Epub 2010 Jul 15. Genome Biol. 2010. PMID: 20633280 Free PMC article.
The Pfam protein families database.
Punta M, Coggill PC, Eberhardt RY, Mistry J, Tate J, Boursnell C, Pang N, Forslund K, Ceric G, Clements J, Heger A, Holm L, Sonnhammer EL, Eddy SR, Bateman A, Finn RD. Punta M, et al. Among authors: bateman a. Nucleic Acids Res. 2012 Jan;40(Database issue):D290-301. doi: 10.1093/nar/gkr1065. Epub 2011 Nov 29. Nucleic Acids Res. 2012. PMID: 22127870 Free PMC article.
The Pfam protein families database.
Finn RD, Mistry J, Tate J, Coggill P, Heger A, Pollington JE, Gavin OL, Gunasekaran P, Ceric G, Forslund K, Holm L, Sonnhammer EL, Eddy SR, Bateman A. Finn RD, et al. Among authors: bateman a. Nucleic Acids Res. 2010 Jan;38(Database issue):D211-22. doi: 10.1093/nar/gkp985. Epub 2009 Nov 17. Nucleic Acids Res. 2010. PMID: 19920124 Free PMC article.
The evolution of protein domain families.
Buljan M, Bateman A. Buljan M, et al. Among authors: bateman a. Biochem Soc Trans. 2009 Aug;37(Pt 4):751-5. doi: 10.1042/BST0370751. Biochem Soc Trans. 2009. PMID: 19614588 Review.
Identifying protein domains with the Pfam database.
Finn R, Griffiths-Jones S, Bateman A. Finn R, et al. Among authors: bateman a. Curr Protoc Bioinformatics. 2003 May;Chapter 2:Unit 2.5. doi: 10.1002/0471250953.bi0205s01. Curr Protoc Bioinformatics. 2003. PMID: 18428696
Predicting active site residue annotations in the Pfam database.
Mistry J, Bateman A, Finn RD. Mistry J, et al. Among authors: bateman a. BMC Bioinformatics. 2007 Aug 9;8:298. doi: 10.1186/1471-2105-8-298. BMC Bioinformatics. 2007. PMID: 17688688 Free PMC article.
SCOOP: a simple method for identification of novel protein superfamily relationships.
Bateman A, Finn RD. Bateman A, et al. Bioinformatics. 2007 Apr 1;23(7):809-14. doi: 10.1093/bioinformatics/btm034. Epub 2007 Feb 3. Bioinformatics. 2007. PMID: 17277330 Free PMC article.
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