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Allele-specific expression reveals interactions between genetic variation and environment.
Knowles DA, Davis JR, Edgington H, Raj A, Favé MJ, Zhu X, Potash JB, Weissman MM, Shi J, Levinson DF, Awadalla P, Mostafavi S, Montgomery SB, Battle A. Knowles DA, et al. Among authors: battle a. Nat Methods. 2017 Jul;14(7):699-702. doi: 10.1038/nmeth.4298. Epub 2017 May 22. Nat Methods. 2017. PMID: 28530654 Free PMC article.
Type I interferon signaling genes in recurrent major depression: increased expression detected by whole-blood RNA sequencing.
Mostafavi S, Battle A, Zhu X, Potash JB, Weissman MM, Shi J, Beckman K, Haudenschild C, McCormick C, Mei R, Gameroff MJ, Gindes H, Adams P, Goes FS, Mondimore FM, MacKinnon DF, Notes L, Schweizer B, Furman D, Montgomery SB, Urban AE, Koller D, Levinson DF. Mostafavi S, et al. Among authors: battle a. Mol Psychiatry. 2014 Dec;19(12):1267-74. doi: 10.1038/mp.2013.161. Epub 2013 Dec 3. Mol Psychiatry. 2014. PMID: 24296977 Free PMC article.
Transcriptome analysis reveals differential splicing events in IPF lung tissue.
Nance T, Smith KS, Anaya V, Richardson R, Ho L, Pala M, Mostafavi S, Battle A, Feghali-Bostwick C, Rosen G, Montgomery SB. Nance T, et al. Among authors: battle a. PLoS One. 2014 Mar 19;9(3):e92111. doi: 10.1371/journal.pone.0092111. eCollection 2014. PLoS One. 2014. PMID: 24647608 Free PMC article.
Transcriptome analysis reveals differential splicing events in IPF lung tissue.
Nance T, Smith KS, Anaya V, Richardson R, Ho L, Pala M, Mostafavi S, Battle A, Feghali-Bostwick C, Rosen G, Montgomery SB. Nance T, et al. Among authors: battle a. PLoS One. 2014 May 7;9(5):e97550. doi: 10.1371/journal.pone.0097550. eCollection 2014. PLoS One. 2014. PMID: 24805851 Free PMC article.
A community effort to assess and improve drug sensitivity prediction algorithms.
Costello JC, Heiser LM, Georgii E, Gönen M, Menden MP, Wang NJ, Bansal M, Ammad-ud-din M, Hintsanen P, Khan SA, Mpindi JP, Kallioniemi O, Honkela A, Aittokallio T, Wennerberg K; NCI DREAM Community; Collins JJ, Gallahan D, Singer D, Saez-Rodriguez J, Kaski S, Gray JW, Stolovitzky G. Costello JC, et al. Nat Biotechnol. 2014 Dec;32(12):1202-12. doi: 10.1038/nbt.2877. Epub 2014 Jun 1. Nat Biotechnol. 2014. PMID: 24880487 Free PMC article.
159 results