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2,049 results
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Improved detection of overrepresentation of Gene-Ontology annotations with parent child analysis.
Grossmann S, Bauer S, Robinson PN, Vingron M. Grossmann S, et al. Among authors: bauer s. Bioinformatics. 2007 Nov 15;23(22):3024-31. doi: 10.1093/bioinformatics/btm440. Epub 2007 Sep 11. Bioinformatics. 2007. PMID: 17848398
Construction and accessibility of a cross-species phenotype ontology along with gene annotations for biomedical research.
Köhler S, Doelken SC, Ruef BJ, Bauer S, Washington N, Westerfield M, Gkoutos G, Schofield P, Smedley D, Lewis SE, Robinson PN, Mungall CJ. Köhler S, et al. Among authors: bauer s. F1000Res. 2013 Feb 1;2:30. doi: 10.12688/f1000research.2-30.v2. eCollection 2013. F1000Res. 2013. PMID: 24358873 Free PMC article.
[No authors listed] [No authors listed] PMID: 24555032
Exact score distribution computation for ontological similarity searches.
Schulz MH, Köhler S, Bauer S, Robinson PN. Schulz MH, et al. Among authors: bauer s. BMC Bioinformatics. 2011 Nov 12;12:441. doi: 10.1186/1471-2105-12-441. BMC Bioinformatics. 2011. PMID: 22078312 Free PMC article.
The Human Phenotype Ontology: a tool for annotating and analyzing human hereditary disease.
Robinson PN, Köhler S, Bauer S, Seelow D, Horn D, Mundlos S. Robinson PN, et al. Among authors: bauer s. Am J Hum Genet. 2008 Nov;83(5):610-5. doi: 10.1016/j.ajhg.2008.09.017. Epub 2008 Oct 23. Am J Hum Genet. 2008. PMID: 18950739 Free PMC article.
Bayesian ontology querying for accurate and noise-tolerant semantic searches.
Bauer S, Köhler S, Schulz MH, Robinson PN. Bauer S, et al. Bioinformatics. 2012 Oct 1;28(19):2502-8. doi: 10.1093/bioinformatics/bts471. Epub 2012 Jul 26. Bioinformatics. 2012. PMID: 22843981 Free PMC article.
Improving ontologies by automatic reasoning and evaluation of logical definitions.
Köhler S, Bauer S, Mungall CJ, Carletti G, Smith CL, Schofield P, Gkoutos GV, Robinson PN. Köhler S, et al. Among authors: bauer s. BMC Bioinformatics. 2011 Oct 27;12:418. doi: 10.1186/1471-2105-12-418. BMC Bioinformatics. 2011. PMID: 22032770 Free PMC article.
Microindel detection in short-read sequence data.
Krawitz P, Rödelsperger C, Jäger M, Jostins L, Bauer S, Robinson PN. Krawitz P, et al. Among authors: bauer s. Bioinformatics. 2010 Mar 15;26(6):722-9. doi: 10.1093/bioinformatics/btq027. Epub 2010 Feb 9. Bioinformatics. 2010. PMID: 20144947
GOing Bayesian: model-based gene set analysis of genome-scale data.
Bauer S, Gagneur J, Robinson PN. Bauer S, et al. Nucleic Acids Res. 2010 Jun;38(11):3523-32. doi: 10.1093/nar/gkq045. Epub 2010 Feb 19. Nucleic Acids Res. 2010. PMID: 20172960 Free PMC article.
Phenotypic overlap in the contribution of individual genes to CNV pathogenicity revealed by cross-species computational analysis of single-gene mutations in humans, mice and zebrafish.
Doelken SC, Köhler S, Mungall CJ, Gkoutos GV, Ruef BJ, Smith C, Smedley D, Bauer S, Klopocki E, Schofield PN, Westerfield M, Robinson PN, Lewis SE. Doelken SC, et al. Among authors: bauer s. Dis Model Mech. 2013 Mar;6(2):358-72. doi: 10.1242/dmm.010322. Epub 2012 Oct 25. Dis Model Mech. 2013. PMID: 23104991 Free PMC article.
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