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Rainbow's end: the quest for multiplexed fluorescence quantitative analysis in proteomics.
Patton WF, Beechem JM. Patton WF, et al. Among authors: beechem jm. Curr Opin Chem Biol. 2002 Feb;6(1):63-9. doi: 10.1016/s1367-5931(01)00284-8. Curr Opin Chem Biol. 2002. PMID: 11827825 Review.
Fluorescence-intensity multiplexing: simultaneous seven-marker, two-color immunophenotyping using flow cytometry.
Bradford JA, Buller G, Suter M, Ignatius M, Beechem JM. Bradford JA, et al. Among authors: beechem jm. Cytometry A. 2004 Oct;61(2):142-52. doi: 10.1002/cyto.a.20037. Cytometry A. 2004. PMID: 15382027
The utility of a two-color fluorescence electrophoretic mobility shift assay procedure for the analysis of DNA replication complexes.
Jing D, Beechem JM, Patton WF. Jing D, et al. Among authors: beechem jm. Electrophoresis. 2004 Aug;25(15):2439-46. doi: 10.1002/elps.200405994. Electrophoresis. 2004. PMID: 15300760
Quantitative comparison of long-wavelength Alexa Fluor dyes to Cy dyes: fluorescence of the dyes and their bioconjugates.
Berlier JE, Rothe A, Buller G, Bradford J, Gray DR, Filanoski BJ, Telford WG, Yue S, Liu J, Cheung CY, Chang W, Hirsch JD, Beechem JM, Haugland RP, Haugland RP. Berlier JE, et al. Among authors: beechem jm. J Histochem Cytochem. 2003 Dec;51(12):1699-712. doi: 10.1177/002215540305101214. J Histochem Cytochem. 2003. PMID: 14623938
Mapping glycosylation changes related to cancer using the Multiplexed Proteomics technology: a protein differential display approach.
Schulenberg B, Beechem JM, Patton WF. Schulenberg B, et al. Among authors: beechem jm. J Chromatogr B Analyt Technol Biomed Life Sci. 2003 Aug 5;793(1):127-39. doi: 10.1016/s1570-0232(03)00370-2. J Chromatogr B Analyt Technol Biomed Life Sci. 2003. PMID: 12880860
Quantitative analysis of protein phosphorylation status and protein kinase activity on microarrays using a novel fluorescent phosphorylation sensor dye.
Martin K, Steinberg TH, Cooley LA, Gee KR, Beechem JM, Patton WF. Martin K, et al. Among authors: beechem jm. Proteomics. 2003 Jul;3(7):1244-55. doi: 10.1002/pmic.200300445. Proteomics. 2003. PMID: 12872225
A sensitive two-color electrophoretic mobility shift assay for detecting both nucleic acids and protein in gels.
Jing D, Agnew J, Patton WF, Hendrickson J, Beechem JM. Jing D, et al. Among authors: beechem jm. Proteomics. 2003 Jul;3(7):1172-80. doi: 10.1002/pmic.200300438. Proteomics. 2003. PMID: 12872218
Global quantitative phosphoprotein analysis using Multiplexed Proteomics technology.
Steinberg TH, Agnew BJ, Gee KR, Leung WY, Goodman T, Schulenberg B, Hendrickson J, Beechem JM, Haugland RP, Patton WF. Steinberg TH, et al. Among authors: beechem jm. Proteomics. 2003 Jul;3(7):1128-44. doi: 10.1002/pmic.200300434. Proteomics. 2003. PMID: 12872214
Strategies and solid-phase formats for the analysis of protein and peptide phosphorylation employing a novel fluorescent phosphorylation sensor dye.
Martin K, Steinberg TH, Goodman T, Schulenberg B, Kilgore JA, Gee KR, Beechem JM, Patton WF. Martin K, et al. Among authors: beechem jm. Comb Chem High Throughput Screen. 2003 Jun;6(4):331-9. doi: 10.2174/138620703106298581. Comb Chem High Throughput Screen. 2003. PMID: 12769676
Analysis of steady-state protein phosphorylation in mitochondria using a novel fluorescent phosphosensor dye.
Schulenberg B, Aggeler R, Beechem JM, Capaldi RA, Patton WF. Schulenberg B, et al. Among authors: beechem jm. J Biol Chem. 2003 Jul 18;278(29):27251-5. doi: 10.1074/jbc.C300189200. Epub 2003 May 20. J Biol Chem. 2003. PMID: 12759343
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