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The structural basis for substrate specificity in DNA topoisomerase IV.
Corbett KD, Schoeffler AJ, Thomsen ND, Berger JM. Corbett KD, et al. Among authors: berger jm. J Mol Biol. 2005 Aug 19;351(3):545-61. doi: 10.1016/j.jmb.2005.06.029. J Mol Biol. 2005. PMID: 16023670
Antitumor bisdioxopiperazines inhibit yeast DNA topoisomerase II by trapping the enzyme in the form of a closed protein clamp.
Roca J, Ishida R, Berger JM, Andoh T, Wang JC. Roca J, et al. Among authors: berger jm. Proc Natl Acad Sci U S A. 1994 Mar 1;91(5):1781-5. doi: 10.1073/pnas.91.5.1781. Proc Natl Acad Sci U S A. 1994. PMID: 8127881 Free PMC article.
On the simultaneous binding of eukaryotic DNA topoisomerase II to a pair of double-stranded DNA helices.
Roca J, Berger JM, Wang JC. Roca J, et al. Among authors: berger jm. J Biol Chem. 1993 Jul 5;268(19):14250-5. J Biol Chem. 1993. PMID: 8390987
Structure and mechanism of DNA topoisomerase II.
Berger JM, Gamblin SJ, Harrison SC, Wang JC. Berger JM, et al. Nature. 1996 Jan 18;379(6562):225-32. doi: 10.1038/379225a0. Nature. 1996. PMID: 8538787
DNA transport by a type II topoisomerase: direct evidence for a two-gate mechanism.
Roca J, Berger JM, Harrison SC, Wang JC. Roca J, et al. Among authors: berger jm. Proc Natl Acad Sci U S A. 1996 Apr 30;93(9):4057-62. doi: 10.1073/pnas.93.9.4057. Proc Natl Acad Sci U S A. 1996. PMID: 8633016 Free PMC article.
Recent developments in DNA topoisomerase II structure and mechanism.
Berger JM, Wang JC. Berger JM, et al. Curr Opin Struct Biol. 1996 Feb;6(1):84-90. doi: 10.1016/s0959-440x(96)80099-6. Curr Opin Struct Biol. 1996. PMID: 8696977 Review.
Type II DNA topoisomerases.
Berger JM. Berger JM. Curr Opin Struct Biol. 1998 Feb;8(1):26-32. doi: 10.1016/s0959-440x(98)80006-7. Curr Opin Struct Biol. 1998. PMID: 9519293 Review.
Structure of DNA topoisomerases.
Berger JM. Berger JM. Biochim Biophys Acta. 1998 Oct 1;1400(1-3):3-18. doi: 10.1016/s0167-4781(98)00124-9. Biochim Biophys Acta. 1998. PMID: 9748476 Review.
Quaternary changes in topoisomerase II may direct orthogonal movement of two DNA strands.
Fass D, Bogden CE, Berger JM. Fass D, et al. Among authors: berger jm. Nat Struct Biol. 1999 Apr;6(4):322-6. doi: 10.1038/7556. Nat Struct Biol. 1999. PMID: 10201398
The structural basis for terminator recognition by the Rho transcription termination factor.
Bogden CE, Fass D, Bergman N, Nichols MD, Berger JM. Bogden CE, et al. Among authors: berger jm. Mol Cell. 1999 Apr;3(4):487-93. doi: 10.1016/s1097-2765(00)80476-1. Mol Cell. 1999. PMID: 10230401
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