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Sequence and gene expression evolution of paralogous genes in willows.
Harikrishnan SL, Pucholt P, Berlin S. Harikrishnan SL, et al. Sci Rep. 2015 Dec 22;5:18662. doi: 10.1038/srep18662. Sci Rep. 2015. PMID: 26689951 Free PMC article.
High-density linkage mapping and evolution of paralogs and orthologs in Salix and Populus.
Berlin S, Lagercrantz U, von Arnold S, Ost T, Rönnberg-Wästljung AC. Berlin S, et al. BMC Genomics. 2010 Feb 23;11:129. doi: 10.1186/1471-2164-11-129. BMC Genomics. 2010. PMID: 20178595 Free PMC article.
Genetic diversity and differentiation among Lagopus lagopus populations in Scandinavia and Scotland: evolutionary significant units confirmed by SNP markers.
Quintela M, Berlin S, Wang B, Höglund J. Quintela M, et al. Mol Ecol. 2010 Jun 1;19(12):2380-93. doi: 10.1111/j.1365-294X.2010.04648.x. Mol Ecol. 2010. PMID: 20636891
Different estimators of genetic diversity such as: number of synonymous and non-synonymous sites, average number of alleles, number and percentage of polymorphic loci, mean nucleotide diversity (pi(s), pi(a)) and gene diversity at synonymous and non-synonymous sites showed …
Different estimators of genetic diversity such as: number of synonymous and non-synonymous sites, average number of alleles, number and perc …
A multilocus assay reveals high nucleotide diversity and limited differentiation among Scandinavian willow grouse (Lagopus lagopus).
Berlin S, Quintela M, Höglund J. Berlin S, et al. BMC Genet. 2008 Dec 19;9:89. doi: 10.1186/1471-2156-9-89. BMC Genet. 2008. PMID: 19099558 Free PMC article.
We found a total of 127 SNP's, which corresponds to 1 SNP every 51 bp. 26 SNP's were amino acid replacement substitutions. Total nucleotide diversity (pit) was between 1.30 x 10(-4) and 7.66 x 10(-3) (average pi(t) = 2.72 x 10(-3) +/- 2.06 x 10(-3)) and silent nucle …
We found a total of 127 SNP's, which corresponds to 1 SNP every 51 bp. 26 SNP's were amino acid replacement substitutions. Tot …
Adaptive evolution of gamete-recognition proteins in birds.
Berlin S, Qu L, Ellegren H. Berlin S, et al. J Mol Evol. 2008 Nov;67(5):488-96. doi: 10.1007/s00239-008-9165-6. Epub 2008 Oct 11. J Mol Evol. 2008. PMID: 18850060
Chicken W: a genetically uniform chromosome in a highly variable genome.
Berlin S, Ellegren H. Berlin S, et al. Proc Natl Acad Sci U S A. 2004 Nov 9;101(45):15967-9. doi: 10.1073/pnas.0405126101. Epub 2004 Nov 1. Proc Natl Acad Sci U S A. 2004. PMID: 15520382 Free PMC article.
Life history and the male mutation bias.
Bartosch-Härlid A, Berlin S, Smith NG, Møller AP, Ellegren H. Bartosch-Härlid A, et al. Evolution. 2003 Oct;57(10):2398-406. doi: 10.1554/03-036. Evolution. 2003. PMID: 14628927
Recent Sex Chromosome Divergence despite Ancient Dioecy in the Willow Salix viminalis.
Pucholt P, Wright AE, Conze LL, Mank JE, Berlin S. Pucholt P, et al. Mol Biol Evol. 2017 Aug 1;34(8):1991-2001. doi: 10.1093/molbev/msx144. Mol Biol Evol. 2017. PMID: 28453634 Free PMC article.
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