Bidkhori G - Search Results

1

Metabolic Network-Based Identification and Prioritization of Anticancer Targets Based on Expression Data in Hepatocellular Carcinoma.

Bidkhori G, Benfeitas R, Elmas E, Kararoudi MN, Arif M, Uhlen M, Nielsen J, Mardinoglu A. Bidkhori G, et al. Front Physiol. 2018 Jul 17;9:916. doi: 10.3389/fphys.2018.00916. eCollection 2018. Front Physiol. 2018. PMID: 30065658 Free PMC article.

2

A pathology atlas of the human cancer transcriptome.

Uhlen M, Zhang C, Lee S, Sjöstedt E, Fagerberg L, Bidkhori G, Benfeitas R, Arif M, Liu Z, Edfors F, Sanli K, von Feilitzen K, Oksvold P, Lundberg E, Hober S, Nilsson P, Mattsson J, Schwenk JM, Brunnström H, Glimelius B, Sjöblom T, Edqvist PH, Djureinovic D, Micke P, Lindskog C, Mardinoglu A, Ponten F. Uhlen M, et al. Among authors: bidkhori g. Science. 2017 Aug 18;357(6352):eaan2507. doi: 10.1126/science.aan2507. Science. 2017. PMID: 28818916

3

TCSBN: a database of tissue and cancer specific biological networks.

Lee S, Zhang C, Arif M, Liu Z, Benfeitas R, Bidkhori G, Deshmukh S, Al Shobky M, Lovric A, Boren J, Nielsen J, Uhlen M, Mardinoglu A. Lee S, et al. Among authors: bidkhori g. Nucleic Acids Res. 2018 Jan 4;46(D1):D595-D600. doi: 10.1093/nar/gkx994. Nucleic Acids Res. 2018. PMID: 29069445 Free PMC article.

4

High Cell Density Perfusion Culture has a Maintained Exoproteome and Metabolome.

Zamani L, Lundqvist M, Zhang Y, Aberg M, Edfors F, Bidkhori G, Lindahl A, Mie A, Mardinoglu A, Field R, Turner R, Rockberg J, Chotteau V. Zamani L, et al. Among authors: bidkhori g. Biotechnol J. 2018 Oct;13(10):e1800036. doi: 10.1002/biot.201800036. Epub 2018 Jul 13. Biotechnol J. 2018. PMID: 29957873

5

Understanding the Representative Gut Microbiota Dysbiosis in Metformin-Treated Type 2 Diabetes Patients Using Genome-Scale Metabolic Modeling.

Rosario D, Benfeitas R, Bidkhori G, Zhang C, Uhlen M, Shoaie S, Mardinoglu A. Rosario D, et al. Among authors: bidkhori g. Front Physiol. 2018 Jun 25;9:775. doi: 10.3389/fphys.2018.00775. eCollection 2018. Front Physiol. 2018. PMID: 29988585 Free PMC article.

6

Tamoxifen-Induced Apoptosis of MCF-7 Cells via GPR30/PI3K/MAPKs Interactions: Verification by ODE Modeling and RNA Sequencing.

Rouhimoghadam M, Safarian S, Carroll JS, Sheibani N, Bidkhori G. Rouhimoghadam M, et al. Among authors: bidkhori g. Front Physiol. 2018 Jul 11;9:907. doi: 10.3389/fphys.2018.00907. eCollection 2018. Front Physiol. 2018. PMID: 30050469 Free PMC article.

7

ESS: A Tool for Genome-Scale Quantification of Essentiality Score for Reaction/Genes in Constraint-Based Modeling.

Zhang C, Bidkhori G, Benfeitas R, Lee S, Arif M, Uhlén M, Mardinoglu A. Zhang C, et al. Among authors: bidkhori g. Front Physiol. 2018 Sep 28;9:1355. doi: 10.3389/fphys.2018.01355. eCollection 2018. Front Physiol. 2018. PMID: 30323767 Free PMC article.

8

Metabolic network-based stratification of hepatocellular carcinoma reveals three distinct tumor subtypes.

Bidkhori G, Benfeitas R, Klevstig M, Zhang C, Nielsen J, Uhlen M, Boren J, Mardinoglu A. Bidkhori G, et al. Proc Natl Acad Sci U S A. 2018 Dec 11;115(50):E11874-E11883. doi: 10.1073/pnas.1807305115. Epub 2018 Nov 27. Proc Natl Acad Sci U S A. 2018. PMID: 30482855 Free PMC article.

9

Characterization of heterogeneous redox responses in hepatocellular carcinoma patients using network analysis.

Benfeitas R, Bidkhori G, Mukhopadhyay B, Klevstig M, Arif M, Zhang C, Lee S, Cinar R, Nielsen J, Uhlen M, Boren J, Kunos G, Mardinoglu A. Benfeitas R, et al. Among authors: bidkhori g. EBioMedicine. 2019 Feb;40:471-487. doi: 10.1016/j.ebiom.2018.12.057. Epub 2018 Dec 31. EBioMedicine. 2019. PMID: 30606699 Free PMC article.

10

Multi-Omic Data Interpretation to Repurpose Subtype Specific Drug Candidates for Breast Cancer.

Turanli B, Karagoz K, Bidkhori G, Sinha R, Gatza ML, Uhlen M, Mardinoglu A, Arga KY. Turanli B, et al. Among authors: bidkhori g. Front Genet. 2019 May 7;10:420. doi: 10.3389/fgene.2019.00420. eCollection 2019. Front Genet. 2019. PMID: 31134131 Free PMC article.

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