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Recovering Gene Interactions from Single-Cell Data Using Data Diffusion.

van Dijk D, Sharma R, Nainys J, Yim K, Kathail P, Carr AJ, Burdziak C, Moon KR, Chaffer CL, Pattabiraman D, Bierie B, Mazutis L, Wolf G, Krishnaswamy S, Pe'er D. van Dijk D, et al. Among authors: bierie b. Cell. 2018 Jul 26;174(3):716-729.e27. doi: 10.1016/j.cell.2018.05.061. Epub 2018 Jun 28. Cell. 2018. PMID: 29961576 Free PMC article.

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Activation of PKA leads to mesenchymal-to-epithelial transition and loss of tumor-initiating ability.

Pattabiraman DR, Bierie B, Kober KI, Thiru P, Krall JA, Zill C, Reinhardt F, Tam WL, Weinberg RA. Pattabiraman DR, et al. Among authors: bierie b. Science. 2016 Mar 4;351(6277):aad3680. doi: 10.1126/science.aad3680. Science. 2016. PMID: 26941323 Free PMC article.

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LACTB is a tumour suppressor that modulates lipid metabolism and cell state.

Keckesova Z, Donaher JL, De Cock J, Freinkman E, Lingrell S, Bachovchin DA, Bierie B, Tischler V, Noske A, Okondo MC, Reinhardt F, Thiru P, Golub TR, Vance JE, Weinberg RA. Keckesova Z, et al. Among authors: bierie b. Nature. 2017 Mar 30;543(7647):681-686. doi: 10.1038/nature21408. Epub 2017 Mar 22. Nature. 2017. PMID: 28329758 Free PMC article.

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Acquisition of a hybrid E/M state is essential for tumorigenicity of basal breast cancer cells.

Kröger C, Afeyan A, Mraz J, Eaton EN, Reinhardt F, Khodor YL, Thiru P, Bierie B, Ye X, Burge CB, Weinberg RA. Kröger C, et al. Among authors: bierie b. Proc Natl Acad Sci U S A. 2019 Apr 9;116(15):7353-7362. doi: 10.1073/pnas.1812876116. Epub 2019 Mar 25. Proc Natl Acad Sci U S A. 2019. PMID: 30910979 Free PMC article.

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Integrin-β4 identifies cancer stem cell-enriched populations of partially mesenchymal carcinoma cells.

Bierie B, Pierce SE, Kroeger C, Stover DG, Pattabiraman DR, Thiru P, Liu Donaher J, Reinhardt F, Chaffer CL, Keckesova Z, Weinberg RA. Bierie B, et al. Proc Natl Acad Sci U S A. 2017 Mar 21;114(12):E2337-E2346. doi: 10.1073/pnas.1618298114. Epub 2017 Mar 7. Proc Natl Acad Sci U S A. 2017. PMID: 28270621 Free PMC article.

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The systemic response to surgery triggers the outgrowth of distant immune-controlled tumors in mouse models of dormancy.

Krall JA, Reinhardt F, Mercury OA, Pattabiraman DR, Brooks MW, Dougan M, Lambert AW, Bierie B, Ploegh HL, Dougan SK, Weinberg RA. Krall JA, et al. Among authors: bierie b. Sci Transl Med. 2018 Apr 11;10(436):eaan3464. doi: 10.1126/scitranslmed.aan3464. Sci Transl Med. 2018. PMID: 29643230 Free PMC article.

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Predicting the response to CTLA-4 blockade by longitudinal noninvasive monitoring of CD8 T cells.

Rashidian M, Ingram JR, Dougan M, Dongre A, Whang KA, LeGall C, Cragnolini JJ, Bierie B, Gostissa M, Gorman J, Grotenbreg GM, Bhan A, Weinberg RA, Ploegh HL. Rashidian M, et al. Among authors: bierie b. J Exp Med. 2017 Aug 7;214(8):2243-2255. doi: 10.1084/jem.20161950. Epub 2017 Jun 30. J Exp Med. 2017. PMID: 28666979 Free PMC article.

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TGF-beta and cancer.

Bierie B, Moses HL. Bierie B, et al. Cytokine Growth Factor Rev. 2006 Feb-Apr;17(1-2):29-40. doi: 10.1016/j.cytogfr.2005.09.006. Epub 2005 Nov 10. Cytokine Growth Factor Rev. 2006. PMID: 16289860 Review.

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A Requirement for p120-catenin in the metastasis of invasive ductal breast cancer.

Kurley SJ, Tischler V, Bierie B, Novitskiy SV, Noske A, Varga Z, Zürrer-Härdi U, Brandt S, Carnahan RH, Cook RS, Muller WJ, Richmond A, Reynolds AB. Kurley SJ, et al. Among authors: bierie b. J Cell Sci. 2020 Nov 2:jcs.250639. doi: 10.1242/jcs.250639. Online ahead of print. J Cell Sci. 2020. PMID: 33097605

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A delicate balance: TGF-beta and the tumor microenvironment.

Stover DG, Bierie B, Moses HL. Stover DG, et al. Among authors: bierie b. J Cell Biochem. 2007 Jul 1;101(4):851-61. doi: 10.1002/jcb.21149. J Cell Biochem. 2007. PMID: 17486574 Review.

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