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Virtual Cell modelling and simulation software environment.
Moraru II, Schaff JC, Slepchenko BM, Blinov ML, Morgan F, Lakshminarayana A, Gao F, Li Y, Loew LM. Moraru II, et al. Among authors: blinov ml. IET Syst Biol. 2008 Sep;2(5):352-62. doi: 10.1049/iet-syb:20080102. IET Syst Biol. 2008. PMID: 19045830 Free PMC article.
Kinetic Modeling using BioPAX ontology.
Ruebenacker O, Moraru II, Schaff JC, Blinov ML. Ruebenacker O, et al. Among authors: blinov ml. Proceedings (IEEE Int Conf Bioinformatics Biomed). 2007 Nov 2;2007:339-348. doi: 10.1109/BIBM.2007.55. Proceedings (IEEE Int Conf Bioinformatics Biomed). 2007. PMID: 20862270 Free PMC article.
Integrating BioPAX pathway knowledge with SBML models.
Ruebenacker O, Moraru II, Schaff JC, Blinov ML. Ruebenacker O, et al. Among authors: blinov ml. IET Syst Biol. 2009 Sep;3(5):317-28. doi: 10.1049/iet-syb.2009.0007. IET Syst Biol. 2009. PMID: 21028923
Pathway Commons at virtual cell: use of pathway data for mathematical modeling.
Blinov ML, Schaff JC, Ruebenacker O, Wei X, Vasilescu D, Gao F, Morgan F, Ye L, Lakshminarayana A, Moraru II, Loew LM. Blinov ML, et al. Bioinformatics. 2014 Jan 15;30(2):292-4. doi: 10.1093/bioinformatics/btt660. Epub 2013 Nov 22. Bioinformatics. 2014. PMID: 24273241 Free PMC article.
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