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Kinase-specific prediction of protein phosphorylation sites.
Miller ML, Blom N. Miller ML, et al. Among authors: blom n. Methods Mol Biol. 2009;527:299-310, x. doi: 10.1007/978-1-60327-834-8_22. Methods Mol Biol. 2009. PMID: 19241022 Review.
Phospho.ELM: a database of experimentally verified phosphorylation sites in eukaryotic proteins.
Diella F, Cameron S, Gemünd C, Linding R, Via A, Kuster B, Sicheritz-Pontén T, Blom N, Gibson TJ. Diella F, et al. Among authors: blom n. BMC Bioinformatics. 2004 Jun 22;5:79. doi: 10.1186/1471-2105-5-79. BMC Bioinformatics. 2004. PMID: 15212693 Free PMC article.
NetAcet: prediction of N-terminal acetylation sites.
Kiemer L, Bendtsen JD, Blom N. Kiemer L, et al. Among authors: blom n. Bioinformatics. 2005 Apr 1;21(7):1269-70. doi: 10.1093/bioinformatics/bti130. Epub 2004 Nov 11. Bioinformatics. 2005. PMID: 15539450
NetPhosBac - a predictor for Ser/Thr phosphorylation sites in bacterial proteins.
Miller ML, Soufi B, Jers C, Blom N, Macek B, Mijakovic I. Miller ML, et al. Among authors: blom n. Proteomics. 2009 Jan;9(1):116-25. doi: 10.1002/pmic.200800285. Proteomics. 2009. PMID: 19053140
NetPhosYeast: prediction of protein phosphorylation sites in yeast.
Ingrell CR, Miller ML, Jensen ON, Blom N. Ingrell CR, et al. Among authors: blom n. Bioinformatics. 2007 Apr 1;23(7):895-7. doi: 10.1093/bioinformatics/btm020. Epub 2007 Feb 5. Bioinformatics. 2007. PMID: 17282998
Identification of phosphorylation sites in protein kinase A substrates using artificial neural networks and mass spectrometry.
Hjerrild M, Stensballe A, Rasmussen TE, Kofoed CB, Blom N, Sicheritz-Ponten T, Larsen MR, Brunak S, Jensen ON, Gammeltoft S. Hjerrild M, et al. Among authors: blom n. J Proteome Res. 2004 May-Jun;3(3):426-33. doi: 10.1021/pr0341033. J Proteome Res. 2004. PMID: 15253423
Coronavirus 3CLpro proteinase cleavage sites: possible relevance to SARS virus pathology.
Kiemer L, Lund O, Brunak S, Blom N. Kiemer L, et al. Among authors: blom n. BMC Bioinformatics. 2004 Jun 6;5:72. doi: 10.1186/1471-2105-5-72. BMC Bioinformatics. 2004. PMID: 15180906 Free PMC article.
Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence.
Blom N, Sicheritz-Pontén T, Gupta R, Gammeltoft S, Brunak S. Blom N, et al. Proteomics. 2004 Jun;4(6):1633-49. doi: 10.1002/pmic.200300771. Proteomics. 2004. PMID: 15174133 Review.
Prediction of proprotein convertase cleavage sites.
Duckert P, Brunak S, Blom N. Duckert P, et al. Among authors: blom n. Protein Eng Des Sel. 2004 Jan;17(1):107-12. doi: 10.1093/protein/gzh013. Protein Eng Des Sel. 2004. PMID: 14985543
Feature-based prediction of non-classical and leaderless protein secretion.
Bendtsen JD, Jensen LJ, Blom N, Von Heijne G, Brunak S. Bendtsen JD, et al. Among authors: blom n. Protein Eng Des Sel. 2004 Apr;17(4):349-56. doi: 10.1093/protein/gzh037. Epub 2004 Apr 28. Protein Eng Des Sel. 2004. PMID: 15115854
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