Complete genome sequences for the anaerobic, extremely thermophilic plant biomass-degrading bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and Caldicellulosiruptor lactoaceticus

J Bacteriol. 2011 Mar;193(6):1483-4. doi: 10.1128/JB.01515-10. Epub 2011 Jan 7.

Abstract

The genus Caldicellulosiruptor contains the most thermophilic, plant biomass-degrading bacteria isolated to date. Previously, genome sequences from three cellulolytic members of this genus were reported (C. saccharolyticus, C. bescii, and C. obsidiansis). To further explore the physiological and biochemical basis for polysaccharide degradation within this genus, five additional genomes were sequenced: C. hydrothermalis, C. kristjanssonii, C. kronotskyensis, C. lactoaceticus, and C. owensensis. Taken together, the seven completed and one draft-phase Caldicellulosiruptor genomes suggest that, while central metabolism is highly conserved, significant differences in glycoside hydrolase inventories and numbers of carbohydrate transporters exist, a finding which likely relates to variability observed in plant biomass degradation capacity.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • DNA, Bacterial / chemistry*
  • DNA, Bacterial / genetics*
  • Genetic Variation
  • Genome, Bacterial*
  • Glycoside Hydrolases / genetics
  • Gram-Positive Bacteria / genetics*
  • Membrane Transport Proteins / genetics
  • Molecular Sequence Data
  • Sequence Analysis, DNA

Substances

  • DNA, Bacterial
  • Membrane Transport Proteins
  • Glycoside Hydrolases

Associated data

  • GENBANK/CP002216
  • GENBANK/CP002219
  • GENBANK/CP002326
  • GENBANK/CP002330