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Pre-existence and emergence of drug resistance in HIV-1 infection.
Bonhoeffer S, Nowak MA. Bonhoeffer S, et al. Proc Biol Sci. 1997 May 22;264(1382):631-7. doi: 10.1098/rspb.1997.0089. Proc Biol Sci. 1997. PMID: 9178534 Free PMC article.
Pre-existence and emergence of drug resistance in a generalized model of intra-host viral dynamics.
Alexander HK, Bonhoeffer S. Alexander HK, et al. Among authors: bonhoeffer s. Epidemics. 2012 Dec;4(4):187-202. doi: 10.1016/j.epidem.2012.10.001. Epub 2012 Oct 24. Epidemics. 2012. PMID: 23351371
Recombination and drug resistance in HIV: population dynamics and stochasticity.
Kouyos RD, Fouchet D, Bonhoeffer S. Kouyos RD, et al. Among authors: bonhoeffer s. Epidemics. 2009 Mar;1(1):58-69. doi: 10.1016/j.epidem.2008.11.001. Epub 2008 Dec 16. Epidemics. 2009. PMID: 21352751
The effect of population structure on the emergence of drug resistance during influenza pandemics.
Débarre F, Bonhoeffer S, Regoes RR. Débarre F, et al. Among authors: bonhoeffer s. J R Soc Interface. 2007 Oct 22;4(16):893-906. doi: 10.1098/rsif.2007.1126. J R Soc Interface. 2007. PMID: 17609176 Free PMC article.
Emergence of drug-resistant influenza virus: population dynamical considerations.
Regoes RR, Bonhoeffer S. Regoes RR, et al. Among authors: bonhoeffer s. Science. 2006 Apr 21;312(5772):389-91. doi: 10.1126/science.1122947. Science. 2006. PMID: 16627735
Recombination in HIV and the evolution of drug resistance: for better or for worse?
Bretscher MT, Althaus CL, Müller V, Bonhoeffer S. Bretscher MT, et al. Among authors: bonhoeffer s. Bioessays. 2004 Feb;26(2):180-8. doi: 10.1002/bies.10386. Bioessays. 2004. PMID: 14745836
Rotating antibiotics does not minimize selection for resistance.
Bonhoeffer S, Wiesch PA, Kouyos RD. Bonhoeffer S, et al. Math Biosci Eng. 2010 Oct;7(4):919-22. doi: 10.3934/mbe.2010.7.919. Math Biosci Eng. 2010. PMID: 21077715 No abstract available.
Evidence for positive epistasis in HIV-1.
Bonhoeffer S, Chappey C, Parkin NT, Whitcomb JM, Petropoulos CJ. Bonhoeffer S, et al. Science. 2004 Nov 26;306(5701):1547-50. doi: 10.1126/science.1101786. Science. 2004. PMID: 15567861
The path of least resistance: aggressive or moderate treatment?
Kouyos RD, Metcalf CJ, Birger R, Klein EY, Abel zur Wiesch P, Ankomah P, Arinaminpathy N, Bogich TL, Bonhoeffer S, Brower C, Chi-Johnston G, Cohen T, Day T, Greenhouse B, Huijben S, Metlay J, Mideo N, Pollitt LC, Read AF, Smith DL, Standley C, Wale N, Grenfell B. Kouyos RD, et al. Among authors: bonhoeffer s. Proc Biol Sci. 2014 Nov 7;281(1794):20140566. doi: 10.1098/rspb.2014.0566. Proc Biol Sci. 2014. PMID: 25253451 Free PMC article.
Modelling cytomegalovirus replication patterns in the human host: factors important for pathogenesis.
Regoes RR, Bowen EF, Cope AV, Gor D, Hassan-Walker AF, Prentice HG, Johnson MA, Sweny P, Burroughs AK, Griffiths PD, Bonhoeffer S, Emery VC. Regoes RR, et al. Among authors: bonhoeffer s. Proc Biol Sci. 2006 Aug 7;273(1596):1961-7. doi: 10.1098/rspb.2006.3506. Proc Biol Sci. 2006. PMID: 16822758 Free PMC article.
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