Bonomi M - Search Results

1

Elucidating the mechanism of substrate recognition by the bacterial Hsp90 molecular chaperone.

Street TO, Zeng X, Pellarin R, Bonomi M, Sali A, Kelly MJ, Chu F, Agard DA. Street TO, et al. Among authors: bonomi m. J Mol Biol. 2014 Jun 12;426(12):2393-404. doi: 10.1016/j.jmb.2014.04.001. Epub 2014 Apr 12. J Mol Biol. 2014. PMID: 24726919 Free PMC article.

2

Modeling of proteins and their assemblies with the Integrative Modeling Platform.

Webb B, Lasker K, Velázquez-Muriel J, Schneidman-Duhovny D, Pellarin R, Bonomi M, Greenberg C, Raveh B, Tjioe E, Russel D, Sali A. Webb B, et al. Among authors: bonomi m. Methods Mol Biol. 2014;1091:277-95. doi: 10.1007/978-1-62703-691-7_20. Methods Mol Biol. 2014. PMID: 24203340

3

The free energy profile of tubulin straight-bent conformational changes, with implications for microtubule assembly and drug discovery.

Peng LX, Hsu MT, Bonomi M, Agard DA, Jacobson MP. Peng LX, et al. Among authors: bonomi m. PLoS Comput Biol. 2014 Feb 6;10(2):e1003464. doi: 10.1371/journal.pcbi.1003464. eCollection 2014 Feb. PLoS Comput Biol. 2014. PMID: 24516374 Free PMC article.

4

Cys-scanning disulfide crosslinking and bayesian modeling probe the transmembrane signaling mechanism of the histidine kinase, PhoQ.

Molnar KS, Bonomi M, Pellarin R, Clinthorne GD, Gonzalez G, Goldberg SD, Goulian M, Sali A, DeGrado WF. Molnar KS, et al. Among authors: bonomi m. Structure. 2014 Sep 2;22(9):1239-1251. doi: 10.1016/j.str.2014.04.019. Epub 2014 Jul 31. Structure. 2014. PMID: 25087511 Free PMC article.

5

Determining protein complex structures based on a Bayesian model of in vivo Förster resonance energy transfer (FRET) data.

Bonomi M, Pellarin R, Kim SJ, Russel D, Sundin BA, Riffle M, Jaschob D, Ramsden R, Davis TN, Muller EG, Sali A. Bonomi M, et al. Mol Cell Proteomics. 2014 Nov;13(11):2812-23. doi: 10.1074/mcp.M114.040824. Epub 2014 Aug 19. Mol Cell Proteomics. 2014. PMID: 25139910 Free PMC article.

6

The molecular architecture of the yeast spindle pole body core determined by Bayesian integrative modeling.

Viswanath S, Bonomi M, Kim SJ, Klenchin VA, Taylor KC, Yabut KC, Umbreit NT, Van Epps HA, Meehl J, Jones MH, Russel D, Velazquez-Muriel JA, Winey M, Rayment I, Davis TN, Sali A, Muller EG. Viswanath S, et al. Among authors: bonomi m. Mol Biol Cell. 2017 Nov 7;28(23):3298-3314. doi: 10.1091/mbc.E17-06-0397. Epub 2017 Aug 16. Mol Biol Cell. 2017. PMID: 28814505 Free PMC article.

7

Simultaneous Determination of Protein Structure and Dynamics Using Cryo-Electron Microscopy.

Bonomi M, Pellarin R, Vendruscolo M. Bonomi M, et al. Biophys J. 2018 Apr 10;114(7):1604-1613. doi: 10.1016/j.bpj.2018.02.028. Biophys J. 2018. PMID: 29642030 Free PMC article.

8

Bayesian Weighing of Electron Cryo-Microscopy Data for Integrative Structural Modeling.

Bonomi M, Hanot S, Greenberg CH, Sali A, Nilges M, Vendruscolo M, Pellarin R. Bonomi M, et al. Structure. 2019 Jan 2;27(1):175-188.e6. doi: 10.1016/j.str.2018.09.011. Epub 2018 Nov 1. Structure. 2019. PMID: 30393052 Free PMC article.

9

High selectivity of the γ-aminobutyric acid transporter 2 (GAT-2, SLC6A13) revealed by structure-based approach.

Schlessinger A, Wittwer MB, Dahlin A, Khuri N, Bonomi M, Fan H, Giacomini KM, Sali A. Schlessinger A, et al. Among authors: bonomi m. J Biol Chem. 2012 Nov 2;287(45):37745-56. doi: 10.1074/jbc.M112.388157. Epub 2012 Aug 29. J Biol Chem. 2012. PMID: 22932902 Free PMC article.

10

Crystal structure of a eukaryotic phosphate transporter.

Pedersen BP, Kumar H, Waight AB, Risenmay AJ, Roe-Zurz Z, Chau BH, Schlessinger A, Bonomi M, Harries W, Sali A, Johri AK, Stroud RM. Pedersen BP, et al. Among authors: bonomi m. Nature. 2013 Apr 25;496(7446):533-6. doi: 10.1038/nature12042. Epub 2013 Mar 31. Nature. 2013. PMID: 23542591 Free PMC article.

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