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SnIPRE: selection inference using a Poisson random effects model.
Eilertson KE, Booth JG, Bustamante CD. Eilertson KE, et al. Among authors: booth jg. PLoS Comput Biol. 2012;8(12):e1002806. doi: 10.1371/journal.pcbi.1002806. Epub 2012 Dec 6. PLoS Comput Biol. 2012. PMID: 23236270 Free PMC article.
Markov Networks of Collateral Resistance: National Antimicrobial Resistance Monitoring System Surveillance Results from Escherichia coli Isolates, 2004-2012.
Love WJ, Zawack KA, Booth JG, Grӧhn YT, Lanzas C. Love WJ, et al. Among authors: booth jg. PLoS Comput Biol. 2016 Nov 16;12(11):e1005160. doi: 10.1371/journal.pcbi.1005160. eCollection 2016 Nov. PLoS Comput Biol. 2016. PMID: 27851767 Free PMC article.
MUS81 generates a subset of MLH1-MLH3-independent crossovers in mammalian meiosis.
Holloway JK, Booth J, Edelmann W, McGowan CH, Cohen PE. Holloway JK, et al. Among authors: booth j. PLoS Genet. 2008 Sep 12;4(9):e1000186. doi: 10.1371/journal.pgen.1000186. PLoS Genet. 2008. PMID: 18787696 Free PMC article.
Transcriptional analysis of Shewanella oneidensis MR-1 with an electrode compared to Fe(III)citrate or oxygen as terminal electron acceptor.
Rosenbaum MA, Bar HY, Beg QK, Segrè D, Booth J, Cotta MA, Angenent LT. Rosenbaum MA, et al. Among authors: booth j. PLoS One. 2012;7(2):e30827. doi: 10.1371/journal.pone.0030827. Epub 2012 Feb 1. PLoS One. 2012. PMID: 22319591 Free PMC article.
Simple sequence repeats provide a substrate for phenotypic variation in the Neurospora crassa circadian clock.
Michael TP, Park S, Kim TS, Booth J, Byer A, Sun Q, Chory J, Lee K. Michael TP, et al. Among authors: booth j. PLoS One. 2007 Aug 29;2(8):e795. doi: 10.1371/journal.pone.0000795. PLoS One. 2007. PMID: 17726525 Free PMC article.
Simple sequence repeats in Neurospora crassa: distribution, polymorphism and evolutionary inference.
Kim TS, Booth JG, Gauch HG Jr, Sun Q, Park J, Lee YH, Lee K. Kim TS, et al. Among authors: booth jg. BMC Genomics. 2008 Jan 23;9:31. doi: 10.1186/1471-2164-9-31. BMC Genomics. 2008. PMID: 18215294 Free PMC article.
RRmix: A method for simultaneous batch effect correction and analysis of metabolomics data in the absence of internal standards.
Salerno S Jr, Mehrmohamadi M, Liberti MV, Wan M, Wells MT, Booth JG, Locasale JW. Salerno S Jr, et al. Among authors: booth jg. PLoS One. 2017 Jun 29;12(6):e0179530. doi: 10.1371/journal.pone.0179530. eCollection 2017. PLoS One. 2017. PMID: 28662051 Free PMC article.
Transcription imparts architecture, function and logic to enhancer units.
Tippens ND, Liang J, Leung AK, Wierbowski SD, Ozer A, Booth JG, Lis JT, Yu H. Tippens ND, et al. Among authors: booth jg. Nat Genet. 2020 Oct;52(10):1067-1075. doi: 10.1038/s41588-020-0686-2. Epub 2020 Sep 21. Nat Genet. 2020. PMID: 32958950
Corrigendum: Shared Multidrug Resistance Patterns in Chicken-Associated Escherichia coli Identified by Association Rule Mining.
Cazer CL, Al-Mamun MA, Kaniyamattam K, Love WJ, Booth JG, Lanzas C, Gröhn YT. Cazer CL, et al. Among authors: booth jg. Front Microbiol. 2020 Jun 30;11:1359. doi: 10.3389/fmicb.2020.01359. eCollection 2020. Front Microbiol. 2020. PMID: 32714298 Free PMC article.
Shared Multidrug Resistance Patterns in Chicken-Associated Escherichia coli Identified by Association Rule Mining.
Cazer CL, Al-Mamun MA, Kaniyamattam K, Love WJ, Booth JG, Lanzas C, Gröhn YT. Cazer CL, et al. Among authors: booth jg. Front Microbiol. 2019 Apr 12;10:687. doi: 10.3389/fmicb.2019.00687. eCollection 2019. Front Microbiol. 2019. PMID: 31031716 Free PMC article.
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