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Interactive Tree Of Life (iTOL) v4: recent updates and new developments.
Letunic I, Bork P. Letunic I, et al. Among authors: bork p. Nucleic Acids Res. 2019 Jul 2;47(W1):W256-W259. doi: 10.1093/nar/gkz239. Nucleic Acids Res. 2019. PMID: 30931475 Free PMC article.
SMART: a web-based tool for the study of genetically mobile domains.
Schultz J, Copley RR, Doerks T, Ponting CP, Bork P. Schultz J, et al. Among authors: bork p. Nucleic Acids Res. 2000 Jan 1;28(1):231-4. doi: 10.1093/nar/28.1.231. Nucleic Acids Res. 2000. PMID: 10592234 Free PMC article.
Re-annotating the Mycoplasma pneumoniae genome sequence: adding value, function and reading frames.
Dandekar T, Huynen M, Regula JT, Ueberle B, Zimmermann CU, Andrade MA, Doerks T, Sánchez-Pulido L, Snel B, Suyama M, Yuan YP, Herrmann R, Bork P. Dandekar T, et al. Among authors: bork p. Nucleic Acids Res. 2000 Sep 1;28(17):3278-88. doi: 10.1093/nar/28.17.3278. Nucleic Acids Res. 2000. PMID: 10954595 Free PMC article.
STRING: a web-server to retrieve and display the repeatedly occurring neighbourhood of a gene.
Snel B, Lehmann G, Bork P, Huynen MA. Snel B, et al. Among authors: bork p. Nucleic Acids Res. 2000 Sep 15;28(18):3442-4. doi: 10.1093/nar/28.18.3442. Nucleic Acids Res. 2000. PMID: 10982861 Free PMC article.
Recent improvements to the SMART domain-based sequence annotation resource.
Letunic I, Goodstadt L, Dickens NJ, Doerks T, Schultz J, Mott R, Ciccarelli F, Copley RR, Ponting CP, Bork P. Letunic I, et al. Among authors: bork p. Nucleic Acids Res. 2002 Jan 1;30(1):242-4. doi: 10.1093/nar/30.1.242. Nucleic Acids Res. 2002. PMID: 11752305 Free PMC article.
SHOT: a web server for the construction of genome phylogenies.
Korbel JO, Snel B, Huynen MA, Bork P. Korbel JO, et al. Among authors: bork p. Trends Genet. 2002 Mar;18(3):158-62. doi: 10.1016/s0168-9525(01)02597-5. Trends Genet. 2002. PMID: 11858840
Human non-synonymous SNPs: server and survey.
Ramensky V, Bork P, Sunyaev S. Ramensky V, et al. Among authors: bork p. Nucleic Acids Res. 2002 Sep 1;30(17):3894-900. doi: 10.1093/nar/gkf493. Nucleic Acids Res. 2002. PMID: 12202775 Free PMC article.
STRING: a database of predicted functional associations between proteins.
von Mering C, Huynen M, Jaeggi D, Schmidt S, Bork P, Snel B. von Mering C, et al. Among authors: bork p. Nucleic Acids Res. 2003 Jan 1;31(1):258-61. doi: 10.1093/nar/gkg034. Nucleic Acids Res. 2003. PMID: 12519996 Free PMC article.
The InterPro Database, 2003 brings increased coverage and new features.
Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Barrell D, Bateman A, Binns D, Biswas M, Bradley P, Bork P, Bucher P, Copley RR, Courcelle E, Das U, Durbin R, Falquet L, Fleischmann W, Griffiths-Jones S, Haft D, Harte N, Hulo N, Kahn D, Kanapin A, Krestyaninova M, Lopez R, Letunic I, Lonsdale D, Silventoinen V, Orchard SE, Pagni M, Peyruc D, Ponting CP, Selengut JD, Servant F, Sigrist CJ, Vaughan R, Zdobnov EM. Mulder NJ, et al. Among authors: bork p. Nucleic Acids Res. 2003 Jan 1;31(1):315-8. doi: 10.1093/nar/gkg046. Nucleic Acids Res. 2003. PMID: 12520011 Free PMC article.
Update on XplorMed: A web server for exploring scientific literature.
Perez-Iratxeta C, Pérez AJ, Bork P, Andrade MA. Perez-Iratxeta C, et al. Among authors: bork p. Nucleic Acids Res. 2003 Jul 1;31(13):3866-8. doi: 10.1093/nar/gkg538. Nucleic Acids Res. 2003. PMID: 12824439 Free PMC article.
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