Botstein D - Search Results

1

Predicting cellular growth from gene expression signatures.

Airoldi EM, Huttenhower C, Gresham D, Lu C, Caudy AA, Dunham MJ, Broach JR, Botstein D, Troyanskaya OG. Airoldi EM, et al. Among authors: botstein d. PLoS Comput Biol. 2009 Jan;5(1):e1000257. doi: 10.1371/journal.pcbi.1000257. Epub 2009 Jan 2. PLoS Comput Biol. 2009. PMID: 19119411 Free PMC article.

2

Coordination of growth rate, cell cycle, stress response, and metabolic activity in yeast.

Brauer MJ, Huttenhower C, Airoldi EM, Rosenstein R, Matese JC, Gresham D, Boer VM, Troyanskaya OG, Botstein D. Brauer MJ, et al. Among authors: botstein d. Mol Biol Cell. 2008 Jan;19(1):352-67. doi: 10.1091/mbc.e07-08-0779. Epub 2007 Oct 24. Mol Biol Cell. 2008. PMID: 17959824 Free PMC article.

3

Genome-wide detection of polymorphisms at nucleotide resolution with a single DNA microarray.

Gresham D, Ruderfer DM, Pratt SC, Schacherer J, Dunham MJ, Botstein D, Kruglyak L. Gresham D, et al. Among authors: botstein d. Science. 2006 Mar 31;311(5769):1932-6. doi: 10.1126/science.1123726. Epub 2006 Mar 9. Science. 2006. PMID: 16527929

4

Comparing whole genomes using DNA microarrays.

Gresham D, Dunham MJ, Botstein D. Gresham D, et al. Among authors: botstein d. Nat Rev Genet. 2008 Apr;9(4):291-302. doi: 10.1038/nrg2335. Nat Rev Genet. 2008. PMID: 18347592 Free PMC article. Review.

5

Slow growth induces heat-shock resistance in normal and respiratory-deficient yeast.

Lu C, Brauer MJ, Botstein D. Lu C, et al. Among authors: botstein d. Mol Biol Cell. 2009 Feb;20(3):891-903. doi: 10.1091/mbc.e08-08-0852. Epub 2008 Dec 3. Mol Biol Cell. 2009. PMID: 19056679 Free PMC article.

6

The repertoire and dynamics of evolutionary adaptations to controlled nutrient-limited environments in yeast.

Gresham D, Desai MM, Tucker CM, Jenq HT, Pai DA, Ward A, DeSevo CG, Botstein D, Dunham MJ. Gresham D, et al. Among authors: botstein d. PLoS Genet. 2008 Dec;4(12):e1000303. doi: 10.1371/journal.pgen.1000303. Epub 2008 Dec 12. PLoS Genet. 2008. PMID: 19079573 Free PMC article.

7

System-level analysis of genes and functions affecting survival during nutrient starvation in Saccharomyces cerevisiae.

Gresham D, Boer VM, Caudy A, Ziv N, Brandt NJ, Storey JD, Botstein D. Gresham D, et al. Among authors: botstein d. Genetics. 2011 Jan;187(1):299-317. doi: 10.1534/genetics.110.120766. Epub 2010 Oct 13. Genetics. 2011. PMID: 20944018 Free PMC article.

8

Yeast metabolic and signaling genes are required for heat-shock survival and have little overlap with the heat-induced genes.

Gibney PA, Lu C, Caudy AA, Hess DC, Botstein D. Gibney PA, et al. Among authors: botstein d. Proc Natl Acad Sci U S A. 2013 Nov 12;110(46):E4393-402. doi: 10.1073/pnas.1318100110. Epub 2013 Oct 28. Proc Natl Acad Sci U S A. 2013. PMID: 24167267 Free PMC article.

9

Genome-wide analysis of nucleotide-level variation in commonly used Saccharomyces cerevisiae strains.

Schacherer J, Ruderfer DM, Gresham D, Dolinski K, Botstein D, Kruglyak L. Schacherer J, et al. Among authors: botstein d. PLoS One. 2007 Mar 28;2(3):e322. doi: 10.1371/journal.pone.0000322. PLoS One. 2007. PMID: 17389913 Free PMC article.

10

Optimized detection of sequence variation in heterozygous genomes using DNA microarrays with isothermal-melting probes.

Gresham D, Curry B, Ward A, Gordon DB, Brizuela L, Kruglyak L, Botstein D. Gresham D, et al. Among authors: botstein d. Proc Natl Acad Sci U S A. 2010 Jan 26;107(4):1482-7. doi: 10.1073/pnas.0913883107. Epub 2010 Jan 8. Proc Natl Acad Sci U S A. 2010. PMID: 20080586 Free PMC article.

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