Boyle J - Search Results

1

Yng1 PHD finger binding to H3 trimethylated at K4 promotes NuA3 HAT activity at K14 of H3 and transcription at a subset of targeted ORFs.

Taverna SD, Ilin S, Rogers RS, Tanny JC, Lavender H, Li H, Baker L, Boyle J, Blair LP, Chait BT, Patel DJ, Aitchison JD, Tackett AJ, Allis CD. Taverna SD, et al. Among authors: boyle j. Mol Cell. 2006 Dec 8;24(5):785-796. doi: 10.1016/j.molcel.2006.10.026. Mol Cell. 2006. PMID: 17157260 Free PMC article.

2

Genome-wide analysis of signaling networks regulating fatty acid-induced gene expression and organelle biogenesis.

Saleem RA, Knoblach B, Mast FD, Smith JJ, Boyle J, Dobson CM, Long-O'Donnell R, Rachubinski RA, Aitchison JD. Saleem RA, et al. Among authors: boyle j. J Cell Biol. 2008 Apr 21;181(2):281-92. doi: 10.1083/jcb.200710009. J Cell Biol. 2008. PMID: 18426976 Free PMC article.

3

QTIPS: a novel method of unsupervised determination of isotopic amino acid distribution in SILAC experiments.

Dilworth DJ, Saleem RA, Rogers RS, Mirzaei H, Boyle J, Aitchison JD. Dilworth DJ, et al. Among authors: boyle j. J Am Soc Mass Spectrom. 2010 Aug;21(8):1417-22. doi: 10.1016/j.jasms.2010.04.002. Epub 2010 Apr 8. J Am Soc Mass Spectrom. 2010. PMID: 20451407 Free PMC article.

4

Genome-wide analysis of effectors of peroxisome biogenesis.

Saleem RA, Long-O'Donnell R, Dilworth DJ, Armstrong AM, Jamakhandi AP, Wan Y, Knijnenburg TA, Niemistö A, Boyle J, Rachubinski RA, Shmulevich I, Aitchison JD. Saleem RA, et al. Among authors: boyle j. PLoS One. 2010 Aug 4;5(8):e11953. doi: 10.1371/journal.pone.0011953. PLoS One. 2010. PMID: 20694151 Free PMC article.

5

Cytoscape: a community-based framework for network modeling.

Killcoyne S, Carter GW, Smith J, Boyle J. Killcoyne S, et al. Among authors: boyle j. Methods Mol Biol. 2009;563:219-39. doi: 10.1007/978-1-60761-175-2_12. Methods Mol Biol. 2009. PMID: 19597788

6

Interfaces to PeptideAtlas: a case study of standard data access systems.

Killcoyne S, Handcock J, Robinson T, Deutsch EW, Boyle J. Killcoyne S, et al. Among authors: boyle j. Brief Bioinform. 2012 Sep;13(5):615-26. doi: 10.1093/bib/bbr067. Epub 2011 Nov 22. Brief Bioinform. 2012. PMID: 22941959 Free PMC article.

7

Managing Chaos: Lessons Learned Developing Software in the Life Sciences.

Killcoyne S, Boyle J. Killcoyne S, et al. Among authors: boyle j. Comput Sci Eng. 2009 Nov;11(6):20-29. doi: 10.1109/MCSE.2009.198. Comput Sci Eng. 2009. PMID: 20700479 Free PMC article. No abstract available.

8

mspecLINE: bridging knowledge of human disease with the proteome.

Handcock J, Deutsch EW, Boyle J. Handcock J, et al. Among authors: boyle j. BMC Med Genomics. 2010 Mar 10;3:7. doi: 10.1186/1755-8794-3-7. BMC Med Genomics. 2010. PMID: 20219133 Free PMC article.

9

Mining PeptideAtlas for biomarkers and therapeutics in human disease.

Killcoyne S, Deutsch EW, Boyle J. Killcoyne S, et al. Among authors: boyle j. Curr Pharm Des. 2012;18(6):748-54. doi: 10.2174/138161212799277833. Curr Pharm Des. 2012. PMID: 22236120 Free PMC article.

10

SAMQA: error classification and validation of high-throughput sequenced read data.

Robinson T, Killcoyne S, Bressler R, Boyle J. Robinson T, et al. Among authors: boyle j. BMC Genomics. 2011 Aug 18;12:419. doi: 10.1186/1471-2164-12-419. BMC Genomics. 2011. PMID: 21851633 Free PMC article.

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