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New and revisited species in Aspergillus section Nigri.
Varga J, Frisvad JC, Kocsubé S, Brankovics B, Tóth B, Szigeti G, Samson RA. Varga J, et al. Among authors: Brankovics B. Stud Mycol. 2011 Jun 30;69(1):1-17. doi: 10.3114/sim.2011.69.01. Stud Mycol. 2011. PMID: 21892239 Free PMC article.
Aspergillus eucalypticola produced pyranonigrin A, funalenone, aurasperone B and other naphtho-γ-pyrones. Aspergillus neoniger is also a biseriate species isolated from desert sand in Namibia, and mangrove water in Venezuela, which produces aurasperone B and pyranonigrin A. ...Aspergillus indologenus produced the insecticidal compounds okaramins A, B, H, and two types of indol-alkaloids which have not been structure elucidated. ...
Aspergillus eucalypticola produced pyranonigrin A, funalenone, aurasperone B and other naphtho-γ-pyrones. Aspergillus neoniger is als …
Phylogeny of dermatophytes with genomic character evaluation of clinically distinct Trichophyton rubrum and T. violaceum.
Zhan P, Dukik K, Li D, Sun J, Stielow JB, Gerrits van den Ende B, Brankovics B, Menken SBJ, Mei H, Bao W, Lv G, Liu W, de Hoog GS. Zhan P, et al. Among authors: Brankovics B. Stud Mycol. 2018 Mar;89:153-175. doi: 10.1016/j.simyco.2018.02.004. Epub 2018 Feb 21. Stud Mycol. 2018. PMID: 29910521 Free PMC article.
GRAbB: Selective Assembly of Genomic Regions, a New Niche for Genomic Research.
Brankovics B, Zhang H, van Diepeningen AD, van der Lee TA, Waalwijk C, de Hoog GS. Brankovics B, et al. PLoS Comput Biol. 2016 Jun 16;12(6):e1004753. doi: 10.1371/journal.pcbi.1004753. eCollection 2016 Jun. PLoS Comput Biol. 2016. PMID: 27308864 Free PMC article.
The program is available with explanatory documentation at https://github.com/b-brankovics/grabb. GRAbB has been tested on Ubuntu (12.04 and 14.04), Fedora (23), CentOS (7.1.1503) and Mac OS X (10.7). Furthermore, GRAbB is available as a docker repository: brankovics/grabb (https://hub.docker.com/r/brankovics/grabb/)....
The program is available with explanatory documentation at https://github.com/b-brankovics/grabb. GRAbB has been tested on Ubu …
Genomic Understanding of an Infectious Brain Disease from the Desert.
Moreno LF, Ahmed AAO, Brankovics B, Cuomo CA, Menken SBJ, Taj-Aldeen SJ, Faidah H, Stielow JB, Teixeira MM, Prenafeta-Boldú FX, Vicente VA, de Hoog S. Moreno LF, et al. Among authors: Brankovics B. G3 (Bethesda). 2018 Mar 2;8(3):909-922. doi: 10.1534/g3.117.300421. G3 (Bethesda). 2018. PMID: 29326229 Free PMC article.
Whole-Genome Sequencing and In Silico Analysis of Two Strains of Sporothrix globosa.
Huang L, Gao W, Giosa D, Criseo G, Zhang J, He T, Huang X, Sun J, Sun Y, Huang J, Zhang Y, Brankovics B, Scordino F, D'Alessandro E, van Diepeningen A, de Hoog S, Huang H, Romeo O. Huang L, et al. Among authors: Brankovics B. Genome Biol Evol. 2016 Dec 14;8(11):3292-3296. doi: 10.1093/gbe/evw230. Genome Biol Evol. 2016. PMID: 27635048 Free PMC article.
The complete mitogenome of Fusarium gerlachii.
Kulik T, Brankovics B, Sawicki J, van Diepeningen AD. Kulik T, et al. Among authors: Brankovics B. Mitochondrial DNA A DNA Mapp Seq Anal. 2016 May;27(3):1895-6. doi: 10.3109/19401736.2014.971275. Epub 2014 Oct 16. Mitochondrial DNA A DNA Mapp Seq Anal. 2016. PMID: 25319291
The linear mitochondrial genome of the quarantine chytrid Synchytrium endobioticum; insights into the evolution and recent history of an obligate biotrophic plant pathogen.
van de Vossenberg BTLH, Brankovics B, Nguyen HDT, van Gent-Pelzer MPE, Smith D, Dadej K, Przetakiewicz J, Kreuze JF, Boerma M, van Leeuwen GCM, André Lévesque C, van der Lee TAJ. van de Vossenberg BTLH, et al. Among authors: Brankovics B. BMC Evol Biol. 2018 Sep 10;18(1):136. doi: 10.1186/s12862-018-1246-6. BMC Evol Biol. 2018. PMID: 30200892 Free PMC article.
A single-nucleotide-polymorphism-based genotyping assay for simultaneous detection of different carbendazim-resistant genotypes in the Fusarium graminearum species complex.
Zhang H, Brankovics B, van der Lee TA, Waalwijk C, van Diepeningen AA, Xu J, Xu J, Chen W, Feng J. Zhang H, et al. Among authors: Brankovics B. PeerJ. 2016 Oct 25;4:e2609. doi: 10.7717/peerj.2609. eCollection 2016. PeerJ. 2016. PMID: 27812414 Free PMC article.
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