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Perturbation biology: inferring signaling networks in cellular systems.
Molinelli EJ, Korkut A, Wang W, Miller ML, Gauthier NP, Jing X, Kaushik P, He Q, Mills G, Solit DB, Pratilas CA, Weigt M, Braunstein A, Pagnani A, Zecchina R, Sander C. Molinelli EJ, et al. Among authors: braunstein a. PLoS Comput Biol. 2013;9(12):e1003290. doi: 10.1371/journal.pcbi.1003290. Epub 2013 Dec 19. PLoS Comput Biol. 2013. PMID: 24367245 Free PMC article.
Source coding by efficient selection of ground-state clusters.
Battaglia D, Braunstein A, Chavas J, Zecchina R. Battaglia D, et al. Among authors: braunstein a. Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Jul;72(1 Pt 2):015103. doi: 10.1103/PhysRevE.72.015103. Epub 2005 Jul 18. Phys Rev E Stat Nonlin Soft Matter Phys. 2005. PMID: 16090025
Efficient supervised learning in networks with binary synapses.
Baldassi C, Braunstein A, Brunel N, Zecchina R. Baldassi C, et al. Among authors: braunstein a. Proc Natl Acad Sci U S A. 2007 Jun 26;104(26):11079-84. doi: 10.1073/pnas.0700324104. Epub 2007 Jun 20. Proc Natl Acad Sci U S A. 2007. PMID: 17581884 Free PMC article.
Finding undetected protein associations in cell signaling by belief propagation.
Bailly-Bechet M, Borgs C, Braunstein A, Chayes J, Dagkessamanskaia A, François JM, Zecchina R. Bailly-Bechet M, et al. Among authors: braunstein a. Proc Natl Acad Sci U S A. 2011 Jan 11;108(2):882-7. doi: 10.1073/pnas.1004751108. Epub 2010 Dec 27. Proc Natl Acad Sci U S A. 2011. PMID: 21187432 Free PMC article.
Stochastic matching problem.
Altarelli F, Braunstein A, Ramezanpour A, Zecchina R. Altarelli F, et al. Among authors: braunstein a. Phys Rev Lett. 2011 May 13;106(19):190601. doi: 10.1103/PhysRevLett.106.190601. Epub 2011 May 9. Phys Rev Lett. 2011. PMID: 21668134
Inference and learning in sparse systems with multiple states.
Braunstein A, Ramezanpour A, Zecchina R, Zhang P. Braunstein A, et al. Phys Rev E Stat Nonlin Soft Matter Phys. 2011 May;83(5 Pt 2):056114. doi: 10.1103/PhysRevE.83.056114. Epub 2011 May 19. Phys Rev E Stat Nonlin Soft Matter Phys. 2011. PMID: 21728612
86 results